Gene YpsIP31758_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2007 
Symbol 
ID5386023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2312022 
End bp2312678 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID640864991 
Producthypothetical protein 
Protein accessionYP_001400980 
Protein GI153948439 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0101882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAC ATAGAGACTG GCAAGGGGCT TTGCTGGATT TCCCCGTAAA TAAAGTGGTT 
TGCGTCGGCA GTAACTATGC CGAACATATC AAAGAGATGG GGAGTACTGC CTCTGTGGAG
CCTGTACTGT TTATCAAACC TGAAACCGCA TTATGCGATA TCCGCCAACC GGTATCGATA
CCGAAAGATT TTGGCTCAGT GCATCATGAA ATTGAATTAG CCGTGTTGAT CGGAACGCCG
TTAAAGCAAG CCAGCGAAGA TAGAGTCGCA CGGGCGATTG CCGGTTACGG TGTGGCATTG
GACTTAACGC TACGTGAGCT GCAGGCAGGT TTTAAAAAAG CGGGGCAACC ATGGGAAAAA
GCCAAGGCGT TTGATGGTTC TTGCCCGATA TCCGGTTTTA TTCCCGTTGC TGAGTTTGGT
GATGCACAGC AGGCAGATTT ATCGCTAACG ATTAATGGGG AAATCCGTCA ACAGGGAAAT
ACCCGTGACA TGATTACACC AATTATTCCG TTAATCAGTT ACATGAGCCG TTTCTTTACC
TTACGTGCTG GCGATATCGT GCTGACCGGT ACGCCGCAAG GCGTAGGGCC GATGCAGTCA
GGTGATATGC TTAAAATTAT GCTCAATGGC AAAACAGTGA ATACCCGCAT AATATAA
 
Protein sequence
MYQHRDWQGA LLDFPVNKVV CVGSNYAEHI KEMGSTASVE PVLFIKPETA LCDIRQPVSI 
PKDFGSVHHE IELAVLIGTP LKQASEDRVA RAIAGYGVAL DLTLRELQAG FKKAGQPWEK
AKAFDGSCPI SGFIPVAEFG DAQQADLSLT INGEIRQQGN TRDMITPIIP LISYMSRFFT
LRAGDIVLTG TPQGVGPMQS GDMLKIMLNG KTVNTRII