Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2007 |
Symbol | |
ID | 5386023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2312022 |
End bp | 2312678 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864991 |
Product | hypothetical protein |
Protein accession | YP_001400980 |
Protein GI | 153948439 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0101882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAC ATAGAGACTG GCAAGGGGCT TTGCTGGATT TCCCCGTAAA TAAAGTGGTT TGCGTCGGCA GTAACTATGC CGAACATATC AAAGAGATGG GGAGTACTGC CTCTGTGGAG CCTGTACTGT TTATCAAACC TGAAACCGCA TTATGCGATA TCCGCCAACC GGTATCGATA CCGAAAGATT TTGGCTCAGT GCATCATGAA ATTGAATTAG CCGTGTTGAT CGGAACGCCG TTAAAGCAAG CCAGCGAAGA TAGAGTCGCA CGGGCGATTG CCGGTTACGG TGTGGCATTG GACTTAACGC TACGTGAGCT GCAGGCAGGT TTTAAAAAAG CGGGGCAACC ATGGGAAAAA GCCAAGGCGT TTGATGGTTC TTGCCCGATA TCCGGTTTTA TTCCCGTTGC TGAGTTTGGT GATGCACAGC AGGCAGATTT ATCGCTAACG ATTAATGGGG AAATCCGTCA ACAGGGAAAT ACCCGTGACA TGATTACACC AATTATTCCG TTAATCAGTT ACATGAGCCG TTTCTTTACC TTACGTGCTG GCGATATCGT GCTGACCGGT ACGCCGCAAG GCGTAGGGCC GATGCAGTCA GGTGATATGC TTAAAATTAT GCTCAATGGC AAAACAGTGA ATACCCGCAT AATATAA
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Protein sequence | MYQHRDWQGA LLDFPVNKVV CVGSNYAEHI KEMGSTASVE PVLFIKPETA LCDIRQPVSI PKDFGSVHHE IELAVLIGTP LKQASEDRVA RAIAGYGVAL DLTLRELQAG FKKAGQPWEK AKAFDGSCPI SGFIPVAEFG DAQQADLSLT INGEIRQQGN TRDMITPIIP LISYMSRFFT LRAGDIVLTG TPQGVGPMQS GDMLKIMLNG KTVNTRII
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