| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2004 |
|---|
| Symbol | |
|---|
| ID | 5388458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 2309013 |
|---|
| End bp | 2310212 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640864988 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_001400977 |
|---|
| Protein GI | 153947823 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0411095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAGTC AGAACCCACC GATATATCTC GATAATAACG CGACAACGGC ACTAGACCCT
GCCGTCCTGC AGGCGATGAT GCCATACCTA ACCCACGCTT ATGGCAATGC CGCCAGTAAG
AGCCACCCCT TTGGCTGGGA AGCGAGCCAG GCTGTTCAAC GGGCCAGAAC ATTAATCGCA
ACCGCTATCA ATGCAGTCAG TCCCGCCGAT ATCATCTTCA CCTCTGGCGC GACAGAATCC
ATCAATCTTG CCATCTTAGG CCTTCAGTAT CAGGGGAATT GGGGGCATAT CATCACCTCC
ATGATTGAAC ACAAGTCAGT TCTGGACTGC TGTGCCAAAC TTGCCGACAG TGGGGTTAGT
GTGACTTATC TGCAGCCACA GCGTGACGGT ATTGTTTCCC TTGATACCCT CTTCCAAGCT
ATCCGGCCCG ATACGCGTCT GGTCTCAATC ATGACTGCCA ACAACGAGAC AGGTACCTTG
CAAAAAGTGG CAGAAATTGG CGCACTCTGC CGGGATAAGG GCATTTTATT TCATACCGAT
GCCACACAGG CGTTCGGGAA AATCGCTTTA GATATGCAAC GGATGAATAT CAGTATGGCC
ACTTTTTCCG CACATAAAGT TTACGGCCCC ATGGGGGTCG GGGCACTTTA TGTCAATACC
GCCGATCCGC ATCTTATGCT TTCACCACTC ATCGTTGGCG GAGGGCATGA GCGAGGTTTA
CGCTCCGGCA CACTCAATGT ACCGGGCATT GTCGGCTTTG GACGCGCCGC CGAACTGGCG
ATGGAAAACA TGTCAGTAGA ATCGGCCAGG CTATGTGATT TACGAAACAG GCTACGGCAG
CACATTCTCG ATACCGTACC GAATGTGCAG GTCAACGGCC ACCTTACTGA ATGCCTGCCC
GGCGTGTTAA ACGTGTCCTT TGAGGGTATC GATGCCGACT CGCTGTTGCT CGAACTCTCT
GACGTTGCCT TGTCCTCAGG ATCCGCCTGC ACCTCCGATC AACAGATACC ATCACACGTG
TTACAGGCTC TAGGGGCGAG TGATGAGCAG ATCCGGGGGA GTGTGCGCTT TGGACTCGGA
CGGTTTAATA ACGAAAGTGA AATCGATTAC GTCTGCCAGC GTCTGGAAAA TACGGTGAAA
ATGCTGAGAT CAATGGCTCC GCTCTCATCT GCTACAACCA CAAACGAGAC AGGAGTCTGA
|
|---|
| Protein sequence | MYSQNPPIYL DNNATTALDP AVLQAMMPYL THAYGNAASK SHPFGWEASQ AVQRARTLIA
TAINAVSPAD IIFTSGATES INLAILGLQY QGNWGHIITS MIEHKSVLDC CAKLADSGVS
VTYLQPQRDG IVSLDTLFQA IRPDTRLVSI MTANNETGTL QKVAEIGALC RDKGILFHTD
ATQAFGKIAL DMQRMNISMA TFSAHKVYGP MGVGALYVNT ADPHLMLSPL IVGGGHERGL
RSGTLNVPGI VGFGRAAELA MENMSVESAR LCDLRNRLRQ HILDTVPNVQ VNGHLTECLP
GVLNVSFEGI DADSLLLELS DVALSSGSAC TSDQQIPSHV LQALGASDEQ IRGSVRFGLG
RFNNESEIDY VCQRLENTVK MLRSMAPLSS ATTTNETGV
|
|---|
| |