Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1999 |
Symbol | fadR |
ID | 5385596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2303088 |
End bp | 2303807 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640864983 |
Product | fatty acid metabolism regulator |
Protein accession | YP_001400972 |
Protein GI | 153950935 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.00814717 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTATAA AGGCGCAAAG TCCTGCCGGT TTCGCGGAAG AGTATATTAT TGAAAGTATT TGGAATAATC GCTTTCCTCC AGGATCTATT TTGCCCGCGG AGCGTGAACT TTCTGAGCTG ATTGGTGTGA CTCGCACAAC ATTGCGCGAA GTACTACAAC GGCTAGCCCG CGATGGCTGG CTCACTATTC AGCACGGTAA GCCAACGAAA GTAAACAATT TTTGGGAGAC ATCTGGTCTA AATATTTTGG AAACACTGGC GCGGCTTGAC CATGACAGCG TTCCACAATT GATAGATAAC TTACTGGCTG TTCGAACCAA TATTGCCACT ATTTTTGTGC GGACAGCTAT CCGTCATCAT CCAGAAAAAG CGCAAGAAAT TTTGGCGCGA GCGAAAACAG TGGATGATAA CGCAGAAGCC TTTACTGCTC TTGATTATGG TATTTTCCGT GGTTTGGCAT TTGCCTCAGG CAATCCGATT TATGGTTTGA TTCTTAATGG TTTGAAAGGG CTTTACACCC GAGTAGGGCG TTATTACTTT TCTAATCCAG AAGCGCGCAA GCTGGCACTG ACTTTTTACA ATAAACTGTC GACGTTATGT GATACAGAAT CTTATGATCA GGTACTAGAG TGCCTGCGCA CATACGGCAA AGAGAGCGGG GCTATCTGGC ATAGCATGCA GGGCACCATG CCAAGTGATT TGGCCGAAGC GCGTCGTTAG
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Protein sequence | MVIKAQSPAG FAEEYIIESI WNNRFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW LTIQHGKPTK VNNFWETSGL NILETLARLD HDSVPQLIDN LLAVRTNIAT IFVRTAIRHH PEKAQEILAR AKTVDDNAEA FTALDYGIFR GLAFASGNPI YGLILNGLKG LYTRVGRYYF SNPEARKLAL TFYNKLSTLC DTESYDQVLE CLRTYGKESG AIWHSMQGTM PSDLAEARR
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