Gene YpsIP31758_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1999 
SymbolfadR 
ID5385596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2303088 
End bp2303807 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content46% 
IMG OID640864983 
Productfatty acid metabolism regulator 
Protein accessionYP_001400972 
Protein GI153950935 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID[TIGR02812] fatty acid metabolism transcriptional regulator FadR 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00814717 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATAA AGGCGCAAAG TCCTGCCGGT TTCGCGGAAG AGTATATTAT TGAAAGTATT 
TGGAATAATC GCTTTCCTCC AGGATCTATT TTGCCCGCGG AGCGTGAACT TTCTGAGCTG
ATTGGTGTGA CTCGCACAAC ATTGCGCGAA GTACTACAAC GGCTAGCCCG CGATGGCTGG
CTCACTATTC AGCACGGTAA GCCAACGAAA GTAAACAATT TTTGGGAGAC ATCTGGTCTA
AATATTTTGG AAACACTGGC GCGGCTTGAC CATGACAGCG TTCCACAATT GATAGATAAC
TTACTGGCTG TTCGAACCAA TATTGCCACT ATTTTTGTGC GGACAGCTAT CCGTCATCAT
CCAGAAAAAG CGCAAGAAAT TTTGGCGCGA GCGAAAACAG TGGATGATAA CGCAGAAGCC
TTTACTGCTC TTGATTATGG TATTTTCCGT GGTTTGGCAT TTGCCTCAGG CAATCCGATT
TATGGTTTGA TTCTTAATGG TTTGAAAGGG CTTTACACCC GAGTAGGGCG TTATTACTTT
TCTAATCCAG AAGCGCGCAA GCTGGCACTG ACTTTTTACA ATAAACTGTC GACGTTATGT
GATACAGAAT CTTATGATCA GGTACTAGAG TGCCTGCGCA CATACGGCAA AGAGAGCGGG
GCTATCTGGC ATAGCATGCA GGGCACCATG CCAAGTGATT TGGCCGAAGC GCGTCGTTAG
 
Protein sequence
MVIKAQSPAG FAEEYIIESI WNNRFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW 
LTIQHGKPTK VNNFWETSGL NILETLARLD HDSVPQLIDN LLAVRTNIAT IFVRTAIRHH
PEKAQEILAR AKTVDDNAEA FTALDYGIFR GLAFASGNPI YGLILNGLKG LYTRVGRYYF
SNPEARKLAL TFYNKLSTLC DTESYDQVLE CLRTYGKESG AIWHSMQGTM PSDLAEARR