| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1992 |
|---|
| Symbol | |
|---|
| ID | 5385650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 2293571 |
|---|
| End bp | 2294845 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640864976 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001400965 |
|---|
| Protein GI | 153950659 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2718] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0160685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTATT TCATTGACAG ACGACTTAAC GGCAAGAATA AAAGCATGGT GAATCGCCAG
CGCTTTTTAC GCCGCTATAA GTCGCAAATT AAACAATCGA TTGCCGATGC CATCAACAAA
CGGTCGGTAA CCGATATAGA AAGTGGCGAG TCAGTTTCAA TACCTATCGA CGACATCAAT
GAGCCAATGT TTCATCAAGG CAATGGTGGG TTGCGCCATC GAGTGCACCC TGGCAATGAC
CACTTTATCA CCAATGACCG GGTAGACCGC CCTCAAGGCG GCGGAGGTGG CGGTAGCGGT
CAAGGTAATG CCGGTAAAGA TGGTGAAGGT GAGGATGAGT TTGTCTTTCA GATCTCTAAA
GATGAATACC TGGACTTACT GTTTGAAGAT CTCGCCCTGC CCAATCTGAA AAGAAACCAG
TACAAACAGC TGGCAGAATT TAAGACACAC CGAGCGGGAT ATACCTCTAA TGGCGTGCCA
GCCAATATCA GTGTGGTACG TTCACTGCAG AATTCACTGG CTCGCCGGAC CGCGATGACC
GCCAGCAAAC GGCGCGAGTT GCGTGAACTG GAGGCGGCGC TTACTGTGCT GGAGAATTCT
GAGCCAGCGC AATTGTTAGA AGAAGAGCGC TTACGCAAGG CGATTACCGA GTTAAAGCAA
AAAATTGCTC GGGTTCCGTT TATTGATACC TTTGATTTAC GCTATAAAAA TTACGAGCGT
CGCCCTGAGC CCTCCAGTCA AGCCGTCATG TTCTGCTTGA TGGATGTCTC GGGATCCATG
GACCAAGCCA CGAAAGATAT GGCTAAGCGG TTTTATATTC TGCTCTATCT CTTCCTGAGC
CGGACCTATA AAAACGTCGA TGTGGTGTAT ATCCGCCACC ATACGCAAGC CAAAGAAGTG
GATGAACAGG AGTTTTTCTA CTCGCAAGAA ACCGGCGGAA CCATCGTCTC CAGTGCACTG
AAATTGATGG ATGAAGTGGT TCAAGAGCGT TATAACCCGG CGCAGTGGAA CATTTATGCC
GCTCAGGCTT CTGATGGTGA TAACTGGGCA GATGACTCAC CGTTGTGCCA TGAATTACTG
GCCAAAAAGA TTCTACCGGT GGTGCGTTAC TACAGTTATA TCGAGATAAC CCGCCGCGCT
CATCAAACGT TATGGCGCGA GTATGAAGAT CTGGAAGAAA AATTCGACAA CTTTGCCATA
CAACATATTC GTGAACCCGA AGATATTTAT CCCGTCTTCC GTGAGTTGTT CCACAAACAG
ACTGTAGATA ATTAG
|
|---|
| Protein sequence | MGYFIDRRLN GKNKSMVNRQ RFLRRYKSQI KQSIADAINK RSVTDIESGE SVSIPIDDIN
EPMFHQGNGG LRHRVHPGND HFITNDRVDR PQGGGGGGSG QGNAGKDGEG EDEFVFQISK
DEYLDLLFED LALPNLKRNQ YKQLAEFKTH RAGYTSNGVP ANISVVRSLQ NSLARRTAMT
ASKRRELREL EAALTVLENS EPAQLLEEER LRKAITELKQ KIARVPFIDT FDLRYKNYER
RPEPSSQAVM FCLMDVSGSM DQATKDMAKR FYILLYLFLS RTYKNVDVVY IRHHTQAKEV
DEQEFFYSQE TGGTIVSSAL KLMDEVVQER YNPAQWNIYA AQASDGDNWA DDSPLCHELL
AKKILPVVRY YSYIEITRRA HQTLWREYED LEEKFDNFAI QHIREPEDIY PVFRELFHKQ
TVDN
|
|---|
| |