Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1946 |
Symbol | tonB |
ID | 5385521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2248696 |
End bp | 2249466 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864930 |
Product | transport protein TonB |
Protein accession | YP_001400921 |
Protein GI | 153948209 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.940635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTAA TAAAATTTTT CTCAGATCGA CGGTTAACAT GGTCACTCAT TTTTTCAATA GGGTTGCACG GGAGTGTTGT TGCGGCACTG CTGTACGTTT CCGTAGAGCA AATGAAAATT CAACCTGAAA TTGAGGATAC GCCTCTTGCT GTAACGATGG TCAATATAGC GGAATTTGCT GCACCACAAC CGGCTGCCGC CGCGCCAGAG CCAGTTCAAG AAACACCAGC CGTGCCCGAA GAGACACCGC CTGTGCTTGA AGAGACACCA CCGGAACCTG AAGAGCTGCC TGAGCCTGTT CCTGAACCCG TGAAACCCAA GCCGAAGCCT GTTAAGAAAG AAGTTAAGAA AGAAGTTAAG AAAGAAGTTA AGAAGCCGGA AGTGAAGAAG ACGCAAGCAC CGCCGGATGA CAAACCGTTT AAATCTGATG AGGCCGCGCT GGTTGCGAAC AATGCACCGG TAAAATCGGC ACCAGTTGCC TCAACACCTG GCTTATCAAC ATCCGCTGGG CCAAAGGCAC TGAGTAAGGC TAAACCCTCT TATCCGGCTC GAGCATTGGC TTTAGGGATT GAAGGGCAGG TTAAAGTACA GTACGACATT GATGAGAGTG GGCGAGTGAC GAATGTCAGA GTGTTAGAAG CAACACCACG TAATACTTTT GAGCGTGAAG TGAAGCAGGT CATGCGTAAA TGGCGTTTTG AAGCGGTCGC TGCTAAAAAC TATGTGACTA CCATTGTGTT CAAGCTCGAT GGCAAAATGG AAATGAATTA A
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Protein sequence | MQLIKFFSDR RLTWSLIFSI GLHGSVVAAL LYVSVEQMKI QPEIEDTPLA VTMVNIAEFA APQPAAAAPE PVQETPAVPE ETPPVLEETP PEPEELPEPV PEPVKPKPKP VKKEVKKEVK KEVKKPEVKK TQAPPDDKPF KSDEAALVAN NAPVKSAPVA STPGLSTSAG PKALSKAKPS YPARALALGI EGQVKVQYDI DESGRVTNVR VLEATPRNTF EREVKQVMRK WRFEAVAAKN YVTTIVFKLD GKMEMN
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