Gene YpsIP31758_1936 details

Gene Information

• Locus tag: YpsIP31758_1936
• Symbol: trpB
• ID: 5388275
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 2240774
• End bp: 2241964
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640864920
• Product: tryptophan synthase subunit beta
• Protein accession: YP_001400911
• Protein GI: 153949702
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0133] Tryptophan synthase beta chain
• TIGRFAM ID: [TIGR00263] tryptophan synthase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACAC TTAATCCCTA TTTTGGCGAA TTTGGCGGTA TGTATGTACC CCAAATTTTA 
GTGCCAGCCC TGAAGCAACT GGAAGACGCA TTCGTCAGTG CTCAACTGGA TCCTGAATTT 
CAGGCCGCAT TTCAAGATTT GTTAAAAAAC TATGCCGGGC GCCCTACTGC CCTGACCTTG 
TGTCAAAATC TGACCAAAGG GACAAAGACC AAGCTATATC TGAAACGCGA AGATCTGCTG 
CACGGCGGTG CACACAAAAC CAATCAGGTT TTAGGTCAGG CTTTATTAGC TAAACGCATG 
GGTAAGACCG AAATTATTGC CGAAACCGGT GCCGGCCAGC ACGGGGTTGC CTCCGCACTG 
GCGTGTGCAT TGCTGGGTTT AAAATGCCGC ATTTATATGG GGGCGAAAGA TATTGAACGT 
CAGTCGCCGA ACGTTTTCCG TATGCGCCTG ATGGGAGCCG AGGTTATTCC AGTGCATAGT 
GGTTCATCGA CGCTGAAAGA TGCCTGTAAT GAAGCGCTAC GTGACTGGTC AGGTACTTAT 
GAAACCGCTC ACTATATGCT GGGTACCGCC GCTGGCCCTC ACCCTTACCC GACAATTGTG 
CGCGAATTCC AACGCATGAT CGGTGAAGAA ACCAAGGCTC AGATACTGGA AAAAGAAGGC 
CGCCTGCCCG ATGCAGTATT GGCCTGTGTT GGTGGCGGTT CTAATGCTAT CGGTATGTTT 
GCTGATTTTA TTGATGAGCC TGATGTGGGT CTGATTGGCG TAGAGCCTGC CGGCTTGGGG 
ATCGAAACCG GGCAACATGG TGCCCCCCTA AAACACGGTA AAGTCGGTAT CTACTTCGGT 
ATGAAATCAC CGATGATGCA GACCAGCGAT GGGCAAATTG AAGAATCTTA CTCTATTTCT 
GCCGGTCTGG ACTTCCCCTC GGTGGGGCCG CAACATGCTT ATTTGAACAG TATTGGGCGG 
GCTGATTATG TCTCCATTAC CGATGATGAG GCTTTAGACG CATTTAAGAC ATTGTCATGT 
AAAGAAGGGA TTATTCCAGC GCTAGAGTCC TCTCATGCTC TGGCACATGC GTTGAAAATG 
ATTAAAGCGG ATCCGGATAA AGAACAAATA CTGGTGGTGA ATCTCTCCGG CCGGGGTGAC 
AAAGATATTT TCACCGTTCA CGATATTCTG AAAGCACGGG GAGAGATTTA A 

 

Protein sequence

MTTLNPYFGE FGGMYVPQIL VPALKQLEDA FVSAQLDPEF QAAFQDLLKN YAGRPTALTL 
CQNLTKGTKT KLYLKREDLL HGGAHKTNQV LGQALLAKRM GKTEIIAETG AGQHGVASAL 
ACALLGLKCR IYMGAKDIER QSPNVFRMRL MGAEVIPVHS GSSTLKDACN EALRDWSGTY 
ETAHYMLGTA AGPHPYPTIV REFQRMIGEE TKAQILEKEG RLPDAVLACV GGGSNAIGMF 
ADFIDEPDVG LIGVEPAGLG IETGQHGAPL KHGKVGIYFG MKSPMMQTSD GQIEESYSIS 
AGLDFPSVGP QHAYLNSIGR ADYVSITDDE ALDAFKTLSC KEGIIPALES SHALAHALKM 
IKADPDKEQI LVVNLSGRGD KDIFTVHDIL KARGEI