Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1919 |
Symbol | ribA |
ID | 5386551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2220241 |
End bp | 2220831 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864903 |
Product | GTP cyclohydrolase II |
Protein accession | YP_001400894 |
Protein GI | 153948061 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00000740242 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTAA AACGTGTAGC AGAAGCAAAG TTACCCACTC CTTGGGGTGA CTTTTTAATG GTCGGTTTTG AAGAATTGGC CACCGGGCAT GACCACCTGG CCTTGATATT CGGTGATATC TCCGGTGATA AACCGGTTCT GTCCCGTGTA CATTCTGAAT GCCTGACTGG TGATGCTTTA TTTAGCCTGC GTTGTGACTG TGGTTTTCAG TTAGAGGTTG CACTGACGCG TATCGCGGAA GAAGGCCGTG GTGTGCTGAT TTATCATCGT CAGGAGGGCC GTAATATTGG CTTGCTGAAT AAAATTCGTG CTTATGCATT GCAGGATTTA GGGGCTGATA CGGTAGAAGC CAATCATCAG CTTGGTTTTG CTGCGGATGA ACGTGATTTC ACACTCTGTT CTGATATGTA TAAATTATTA GGCATCAAAG CGGTTCGTCT GCTGACCAAC AACCCTAAAA AGGTCGAGAT CCTCACCCAA GCGGGGATCA ATATCGTCGA ACGTGTGCCA CTGATCGTGG GCGAAAACCC AAAAAACGAA CATTATCTGG CAACCAAAGC GGCCAAAATG GGGCATTTAC TCACCAAATA A
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Protein sequence | MQLKRVAEAK LPTPWGDFLM VGFEELATGH DHLALIFGDI SGDKPVLSRV HSECLTGDAL FSLRCDCGFQ LEVALTRIAE EGRGVLIYHR QEGRNIGLLN KIRAYALQDL GADTVEANHQ LGFAADERDF TLCSDMYKLL GIKAVRLLTN NPKKVEILTQ AGINIVERVP LIVGENPKNE HYLATKAAKM GHLLTK
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