Gene YpsIP31758_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1910 
SymbolaraD 
ID5386731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2213682 
End bp2214377 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content50% 
IMG OID640864894 
ProductL-ribulose-5-phosphate 4-epimerase 
Protein accessionYP_001400885 
Protein GI153948932 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00106894 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAACG AACTGAAGCA GCAAGTTCTT GCCGCTAATC TTGCTCTACC GCGCCATAAT 
CTGGTGACAT TCACTTGGGG TAATGTTAGT GCTATCGATC GCCAAAAGGG TTTACTGGTG
ATTAAGCCTT CAGGTGTGGA ATATGCGTCC ATGACACTGG ATGATATGGT GGTCGTGGAG
TTGGAGAGCG GCAACGTCGT TGAGGGCAAC AAAAAACCAT CATCAGACAC GGATACTCAC
CGCGTGCTGT ATCTTAATTT CCCCCAAATT GGGGGCATAG TGCATACCCA CTCCCGTCAT
GCAACTATTT GGGCGCAGGC GGGGCTAGAC TTGCCTGCTT GGGGGACAAC CCATGCTGAT
TACTTCTATG GCTCCATCCC CTGTACCCGT TTGATGACAC ATGAAGAAAT TGCGGGTCGT
TATGAATGGG AAACCGGTAA TGTCATCGTT GATACTTTCC ATGAAAGGGG CATCACCCCA
GATGCTGTAC CTGCGGCGTT GGTGAACTCT CATGGGCCAT TTGCCTGGGG TAGCAGTGCG
GAGAATGCAG TACACAATGC GGTAGTCTTG GAAGAGTTAG CGTATATGGG CATTTTCTCG
CGTCAATTGA ACCCGCAGTT GGGCGATATG CAACCGCAAC TGCTGGATAA GCATTACTTA
CGTAAACATG GCAAGGATGC GTACTACGGC CAATAA
 
Protein sequence
MLNELKQQVL AANLALPRHN LVTFTWGNVS AIDRQKGLLV IKPSGVEYAS MTLDDMVVVE 
LESGNVVEGN KKPSSDTDTH RVLYLNFPQI GGIVHTHSRH ATIWAQAGLD LPAWGTTHAD
YFYGSIPCTR LMTHEEIAGR YEWETGNVIV DTFHERGITP DAVPAALVNS HGPFAWGSSA
ENAVHNAVVL EELAYMGIFS RQLNPQLGDM QPQLLDKHYL RKHGKDAYYG Q