Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1910 |
Symbol | araD |
ID | 5386731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2213682 |
End bp | 2214377 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864894 |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_001400885 |
Protein GI | 153948932 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00106894 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAACG AACTGAAGCA GCAAGTTCTT GCCGCTAATC TTGCTCTACC GCGCCATAAT CTGGTGACAT TCACTTGGGG TAATGTTAGT GCTATCGATC GCCAAAAGGG TTTACTGGTG ATTAAGCCTT CAGGTGTGGA ATATGCGTCC ATGACACTGG ATGATATGGT GGTCGTGGAG TTGGAGAGCG GCAACGTCGT TGAGGGCAAC AAAAAACCAT CATCAGACAC GGATACTCAC CGCGTGCTGT ATCTTAATTT CCCCCAAATT GGGGGCATAG TGCATACCCA CTCCCGTCAT GCAACTATTT GGGCGCAGGC GGGGCTAGAC TTGCCTGCTT GGGGGACAAC CCATGCTGAT TACTTCTATG GCTCCATCCC CTGTACCCGT TTGATGACAC ATGAAGAAAT TGCGGGTCGT TATGAATGGG AAACCGGTAA TGTCATCGTT GATACTTTCC ATGAAAGGGG CATCACCCCA GATGCTGTAC CTGCGGCGTT GGTGAACTCT CATGGGCCAT TTGCCTGGGG TAGCAGTGCG GAGAATGCAG TACACAATGC GGTAGTCTTG GAAGAGTTAG CGTATATGGG CATTTTCTCG CGTCAATTGA ACCCGCAGTT GGGCGATATG CAACCGCAAC TGCTGGATAA GCATTACTTA CGTAAACATG GCAAGGATGC GTACTACGGC CAATAA
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Protein sequence | MLNELKQQVL AANLALPRHN LVTFTWGNVS AIDRQKGLLV IKPSGVEYAS MTLDDMVVVE LESGNVVEGN KKPSSDTDTH RVLYLNFPQI GGIVHTHSRH ATIWAQAGLD LPAWGTTHAD YFYGSIPCTR LMTHEEIAGR YEWETGNVIV DTFHERGITP DAVPAALVNS HGPFAWGSSA ENAVHNAVVL EELAYMGIFS RQLNPQLGDM QPQLLDKHYL RKHGKDAYYG Q
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