Gene YpsIP31758_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1908 
Symbol 
ID5387351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2212406 
End bp2213071 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID640864892 
Productfructose-6-phosphate aldolase 
Protein accessionYP_001400883 
Protein GI153950108 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.000869598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTT ATCTCGACAC GGCAGATGTT GCGGCGGTAA AACGATTAGC GCGGGTGCTG 
CCTTTGCAGG GTGTAACCAC TAACCCAAGT ATTTTGGCAA AAGCGGGCAA ATCCCTATGG
GAGGTTTTGC CTGCGCTACG TGACGCACTG GGAGGGACGG GGAAGTTATT TGCCCAAGTG
CTGGCCAGTG ATAGCGAACG TATGGTCTCT GAGGCGGTAC AGCTGTCAGA GCAGATCCCT
GGATTAGTGA TTAAAATCCC TGTCACGGCC GAAGGGTTGG CGGCGATCAA AAAATTGAAG
ACGATGTCAA TTCCAACCTT GGGTACTGCG GTATACGGCG CAGGGCAAGG GCTATTATCC
GTGTTGGCGG GAGCGGAATA TGTCGCACCG TATGTCAATC GACTGGATGC GCAAGGGAGC
GATGGGATTG CTATGGTACG TGAGTTGCAG CAGTTACTCA CGTTACATGC CCCAAACGCT
AAAGTGTTGG CGGCCAGTTT TCGTACACCT CGCCAAGTAC TGGATTGTTT GCTGGCCGGT
TGCCAATCGG TCACTATCCC GGTCGATGTG GCAGAGCAGT TTATCAGTAC GCCTGCGGTA
AAAGCGGCGG TAGAACAATT TGAGCAAGAT TGGCAGGGGG CATTTGGGAC GACGATGTTG
AGTTAG
 
Protein sequence
MELYLDTADV AAVKRLARVL PLQGVTTNPS ILAKAGKSLW EVLPALRDAL GGTGKLFAQV 
LASDSERMVS EAVQLSEQIP GLVIKIPVTA EGLAAIKKLK TMSIPTLGTA VYGAGQGLLS
VLAGAEYVAP YVNRLDAQGS DGIAMVRELQ QLLTLHAPNA KVLAASFRTP RQVLDCLLAG
CQSVTIPVDV AEQFISTPAV KAAVEQFEQD WQGAFGTTML S