| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1896 |
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| Symbol | |
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| ID | 5387166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2197811 |
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| End bp | 2199907 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640864880 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_001400871 |
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| Protein GI | 153947990 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.813056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAGC TGTTTACTGC CCGCCAACAT GACAAGATCT GGGATTTCGA TGGCGGTATC
CACCCACCAG AAATGAAACT GCAATCAAGC ACGGTCCCCA TGCGTATCGC GCCTTTGCCA
GATCAATTAA TTATCCCTTT GCAACAGCAC TTGGGGCCGG AGGGTGAACT GCGGGTACGG
GCGGGTGAGC AAGTATTGAA GGGGCAGCCA CTGACCGTTG GCCGTGGCCG TACAGTTCCA
GTTCATGCCC CTACTTCAGG GATGATCACT GCGATTGCTC CACATACCAC CGCCCACCCA
TCCGGCTTAG CTGAACTTTG CGTCCATATT ACCCCTGATG GTGAAGATCG CTGGCGTGAA
CAACAGCCGT GGGCTGACTA TCGCCAGCGC GATAAAATGG CCCTGCTTGA CCGTATTCAC
CAAGCAGGCA TTGCCGGTTT GGGGGGCGCA GGTTTCCCAA CTGCCAGCAA GCTGCAAGGG
GGGTTGAATG GGATTATCAC GTTAATCATC AACGCGGCGG AATGCGAACC CTATATCACT
GCTGATGATC GTTTGATGCA AGAGCATGCT GATGAAGTCA TAACGGGTAT CCATATTTTA
CGGCATTTGT TGCAGCCTCA GCAGGTACTG ATTGGGATAG AAGATAATAA GCCAGAGGCG
ATTGCGGCAC TGCAACGGGC ATTACGTGGG CAAGACGACA TTCACTTACG TGTTGTCCCC
ACCAAGTACC CATCAGGGGG AGCCAAGCAA TTAACCAAGA TTCTGACGGG CAAAGAAGTC
CCCTTTGGCA AGCATTCGTC ATCCATTGGT GTATTAATGC AAAACGTCGG TACTGTCGTG
GCTATCAAAC GGGCAGTTAT CGACGATGAA CCACTGATTG AGCGGGTGGT GACATTAACC
GGTGATGCCC TGTCATCGCC TGGAAACTTT TGGGCCAGAA TCGGCACACC AGTACTGTAT
TTACTTAAAT TGGCCGGTTT CAAGCCTCAA AACCCGCCAA TGGTGATTAT GGGGGGGCCA
TTGATGGGCT TTACTTTGCC CAGTTTGGAT GTCCCCATCG TTAAAATCAG TAACTGCATT
TTAGCGCCCG CTGAAACGGA AATGGGCCTA TCTGAACCAG AGCAATCCTG TATCCGTTGC
GGTTTATGTG TTGACGCCTG CCCTGCAGGA TTATTGCCTC AACAACTCTA CTGGTTTAGC
CGTGGTGAAG AACACGAAAA GGCCCGCAAT CATAATTTGT TCGATTGTAT AGAATGCGGT
GCCTGCGCCT ATGTTTGCCC CAGTAATATT CCTCTAGTGC AATATTACCG GCAAGAAAAA
GCAGAAATAC GCGCCCTCGA TCAGGAGAGC GCTCGTGCAG CCGAAGCTAA AGCACGATTT
GAAGCGAAGC AAGCCCGTCT GGCGCGGGAG AAGTTGGCCA GAGAATTACG GCATAAGCAA
GCCGCTGTCA AATTGACCGA TGCTGATCAA CAAACAGTTG ACGCTGCTGT CAGTCGTTTG
ACCCGCCAAT CTGATGGCTC AGAGTCTGTT ATCAATATCC CCGCAGGGCA AATGCCGGAT
AACAGTGCAG TTATTGCCGC CCGTGAAGCC CGAAAAGCAC AGGCCAGAGC ACGGCAGGCA
GAGAAACAGC AGGCACGATC AACGGAAGAA ACAACCGACG TTGTTGATCC TCGTCAAGCC
GCAGTAGCCG CCGCTATCGC CAGAGTCAAA GCTAAGAAAG CCGCTCAGGT ACAACACGTT
ACCACTGACG TGGCGGAGGC GGGATCAGAG GCCATAGCAG AAGACCCACG GAAAGCCGCA
GTAGCCGCCG CTATTGCCAG AGTCAAAGCA AAGAAAGCCG CTCAGGCACA ACACGTTACC
ACTGACGTGG CGGAAGCGGG ATCAGAGGCC ATGGCAGAAG ACCCACGGAA AGCCGCAGTA
GCCGCCGCTA TTGCCAGAGT CAAAGCAAAG AAAGCCGCTC AGGCACAACA CGTTACCACT
GACGTGGCGG AGGCGGGATC AGAGGCCATA GCAGAAGATC CACGGAAAGC CGCTGTGGCC
GCCGCTATCG CCAGAGTCAA AGCCAAGAAA GCCGCTCAAG CGATAAATCC TGACTAA
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| Protein sequence | MFKLFTARQH DKIWDFDGGI HPPEMKLQSS TVPMRIAPLP DQLIIPLQQH LGPEGELRVR
AGEQVLKGQP LTVGRGRTVP VHAPTSGMIT AIAPHTTAHP SGLAELCVHI TPDGEDRWRE
QQPWADYRQR DKMALLDRIH QAGIAGLGGA GFPTASKLQG GLNGIITLII NAAECEPYIT
ADDRLMQEHA DEVITGIHIL RHLLQPQQVL IGIEDNKPEA IAALQRALRG QDDIHLRVVP
TKYPSGGAKQ LTKILTGKEV PFGKHSSSIG VLMQNVGTVV AIKRAVIDDE PLIERVVTLT
GDALSSPGNF WARIGTPVLY LLKLAGFKPQ NPPMVIMGGP LMGFTLPSLD VPIVKISNCI
LAPAETEMGL SEPEQSCIRC GLCVDACPAG LLPQQLYWFS RGEEHEKARN HNLFDCIECG
ACAYVCPSNI PLVQYYRQEK AEIRALDQES ARAAEAKARF EAKQARLARE KLARELRHKQ
AAVKLTDADQ QTVDAAVSRL TRQSDGSESV INIPAGQMPD NSAVIAAREA RKAQARARQA
EKQQARSTEE TTDVVDPRQA AVAAAIARVK AKKAAQVQHV TTDVAEAGSE AIAEDPRKAA
VAAAIARVKA KKAAQAQHVT TDVAEAGSEA MAEDPRKAAV AAAIARVKAK KAAQAQHVTT
DVAEAGSEAI AEDPRKAAVA AAIARVKAKK AAQAINPD
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