| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1889 |
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| Symbol | |
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| ID | 5388345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2189866 |
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| End bp | 2192004 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864873 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001400864 |
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| Protein GI | 153948819 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAGT CTTATTCAAC TCTGGCCGCC GAGGGCACCA AGGTTATTCA GCCACTGGAG
GCGTTGGCGT GTGCTGCTAC CTGTTTTGAT TTAACCATCG AAGCTTCGCA ATTGGCACAC
CAACTAGGCT TAGCTCCCGA TGAGATAGAC AGTATTGCCT TGTGCCGTTG TGCTGCTTGG
ATAGGGTTAC GAGCGCGGAA AGTTAATCAG TCTTTTGAAC GTGTGGGAAA GCTGGTATTA
CCCGTTTTAT TCAGTGATGG TGCTCAGTGG TATGTTTTGC TGTCGCTGAC CGCGCAGGAG
GCCACTGTCT ATTTTGCAGG CAGCGACCAG ACGCGGAAAA TAAGTCCAGA AGTCCTTGCA
AAATTGTGGC GCAATGAGGT GATTTTGCTG GCGAAAGCGG AACCGATAAC GGCCAAAAAG
CAGTTTTTCG GTTTTAGCTG GTTTATTCCG GTGGTGATGA AGTCCCGGCA TCAGCTACGT
AACATTATTC TTATCTCATT ACTGCTACAA GCCATTTTAC TCGTCACGCC AATGCTATTT
GAAACCGTTA TCGATAAAGT GTTGGTAAGC CGCGGGGTCG ATAGTTTGGT GGTTCTAGGT
GGAGCCATGG TGGCACTGGC GATTGCTGAA CCGGGGTATA CCTTATTACG TAGCTGGCTG
TTTGCGCATT TGTCCAGCAG GGTGGGGGCT GAACTCAATA CACAGTTATA TCGGCATCTT
CTGGGGCTGC CACTGGGGTA TTTTACCGGC CAACAGACAG GGCAAACTAT CGCCAAGATG
CGAGAAATGG AGCAAATTCG CAGCTTCCTT ACGGGCTCAG CCCTGACTAT GGTGTTGGAT
CTGTTTTTTG TCGTCACCTT TATTGCCGTG ATGTTTCGCT ACAGTGGTCA ATTGACGGGG
ATCGTATTGA TTTCCCTGCT TTGTTATCTG CTATTTTGGT CGGCAGTTGG GGGGCGGTTA
CGCAAGCGAG TGGCGCAGCA ATACGAAACC AGTGCGCAAG CAACCTCGTT CCTGACCGAG
GCGGTCAGCG GGGTAGAAAC CATCAAAACC TCGGCAACCG AAAGTCAGTT TAACCGGCGT
TGGCGTCAAG TATTAGCACG CTATGTACGG GCCTCTTTTG GCAGTTCGCA GGCAGGGAAC
TTGGCAGGTC AAGGGATCTC GCTCATTAAT AAAATAACGT CAGCAATTCT GTTATGGTTT
GGCGTGACCC TCGTATTGGC AGGAAAACTC AGCCCAGGTG AACTGGTGGC GTTTAATATG
TTTGCCGGTT ACGTAACCCA ACCTATATTA CGCTTGGCTC AGGCATGGCA AGACTTCCAA
CATACGCAGA TTGCGCTGGA GCGGATTGGC ACCATTCTGG ATAGCCCCAC CGAACCCGGA
AGTGCCGGGC TGGTTGCCAA CTGCGAACGG GCAGGGAGCT TAAGTTTTAA GCAAGTGCGC
TTCCGTTATC GCCCTGATAC CGCAGAAGTT TTACAAAATC TCAATCTGGA GATTGCCGGT
GGAGAATTTA TCGGCATTAC CGGGCCATCG GGGTGCGGTA AATCGACACT GACCAAGCTA
ATGCAACGCT TATATACGCC ACAACATGGG CAGATTCTGG TCGATGGGCA GGATTTGGCG
ATTACTGACC CCACCACGCT GCGCCGTCAA ATGAGTGTGG TATTGCAGGA AAGCGTTCTA
TTTTCGGGCA GCATTCGGGA CAATATTTGT CAATGTCGGC CCAATGCAGA TGAGGCTCAT
GTGATACATA TTGCCCGGTT GGCCGGGGCG CATGATTTTA TTATTGCGTT GCCGCAGGGT
TATCAAACTC AGGTCGGTGA AAAGGGGGGG CTGCTTTCTG GCGGGCAACG TCAGCGGATT
GCACTGGCAA GGGCGCTGAT GGCTGATCCC AAGATTCTTA TCCTTGATGA AGCAACCAGT
GCGTTGGACT ATGAATCGGA GGCGGCGATT ATGCGCCAAT TACCGGAAAT CACCCGTAAC
CGCACGGTTA TCTGCATTGC ACACCGTTTG AATACACTAC GTCAGTGCCA CCGCATTTTG
TTACTAAAAG ATGGGCAAAT TGCGGAGCAA GGTAGTCATG AAGTCTTGGT AGCAAGTGGT
GGGAATTACG CTCGTCTGTG GCAACAGCAG ACAGAGTAG
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| Protein sequence | MTESYSTLAA EGTKVIQPLE ALACAATCFD LTIEASQLAH QLGLAPDEID SIALCRCAAW
IGLRARKVNQ SFERVGKLVL PVLFSDGAQW YVLLSLTAQE ATVYFAGSDQ TRKISPEVLA
KLWRNEVILL AKAEPITAKK QFFGFSWFIP VVMKSRHQLR NIILISLLLQ AILLVTPMLF
ETVIDKVLVS RGVDSLVVLG GAMVALAIAE PGYTLLRSWL FAHLSSRVGA ELNTQLYRHL
LGLPLGYFTG QQTGQTIAKM REMEQIRSFL TGSALTMVLD LFFVVTFIAV MFRYSGQLTG
IVLISLLCYL LFWSAVGGRL RKRVAQQYET SAQATSFLTE AVSGVETIKT SATESQFNRR
WRQVLARYVR ASFGSSQAGN LAGQGISLIN KITSAILLWF GVTLVLAGKL SPGELVAFNM
FAGYVTQPIL RLAQAWQDFQ HTQIALERIG TILDSPTEPG SAGLVANCER AGSLSFKQVR
FRYRPDTAEV LQNLNLEIAG GEFIGITGPS GCGKSTLTKL MQRLYTPQHG QILVDGQDLA
ITDPTTLRRQ MSVVLQESVL FSGSIRDNIC QCRPNADEAH VIHIARLAGA HDFIIALPQG
YQTQVGEKGG LLSGGQRQRI ALARALMADP KILILDEATS ALDYESEAAI MRQLPEITRN
RTVICIAHRL NTLRQCHRIL LLKDGQIAEQ GSHEVLVASG GNYARLWQQQ TE
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