Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1887 |
Symbol | araA |
ID | 5388045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2188152 |
End bp | 2189654 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864871 |
Product | L-arabinose isomerase |
Protein accession | YP_001400862 |
Protein GI | 153948295 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.45012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTAT TCAAGCAATC AGAAGTGTGG TTTGTCATTG GTAGCCAGAA TCTGTATGGC CCTAAAACCC TGCAACAAGT TATGGATAAT GCACATCAGG TGGTCAATAG CCTGAACAGC GAAGCGGGTT TACCCGTAAA ACTGGTATTA AAACCGTTGG TTACAACACC GGATGAAATC ACCGCATTAT GTCGTGAAGC TAACTACGAC ACGGCCTGTA TCGGTATCAT GACCTGGCTG CACACCTTCT CTCCGGCCAA AATGTGGATT GGCGGCCTGA GCATTCTGAA TAAACCGCTG TTACAGTTCC ATACCCAGTT TAATGCCCAA ATCCCGTGGG AAACGATGGA TATGGACTTT ATGAACCTAA ACCAGACCGC ACACGGTGGC CGTGAATTTG GTTTCATTGG TGCCCGCATG CGCCAGCAAC ACAGTGTGAT AACCGGTCAC TGGCAGGATA AAGAAGCCCA CCAGCGCATT GGTCAGTGGA TGCGCGTCGC CGCCGCAAAA CAAGAAAGTC AACAACTGAA AGTGGCGCGC TTTGGCGATA ACATGCGTGA AGTCGCCGTA ACTGAAGGGG ATAAAGTCGC TGCCCAGATC CAATTTGGCT ATTCCGTTAA TGCTTATGGC ATTGGGGATT TAGTCGCCGT GGTCGATGCC GTCAGTAAAG GTGATATCGA TACGCTGGTT GAAGAATATG AGGCCACCTA TCGCTTTAGC GATGCGGTGA AACTCAATGG TGATAAGCGC GAAAACTTAC TGGATGCAGC ACGTATTGAG CTAGGTATGA AGCGTTTTCT GGAGCAAGGT GGTTTTAAAG CCTTCACCAC TAACTTTGAA AATCTTTATG GTTTGAAGCA GTTACCTGGC CTGGCAGTCC AGCGACTCAT GCAACAGGGT TACGGTTTTG GTGGCGAAGG CGACTGGAAA ACCGCCGCAT TACTGCGCAT CTTAAAAGTG ATGGGAACCG GCCTGAAAGG CGGCACTTCC TTTATGGAGG ATTACACTTA TAACTTCCAG CCAGGTAATG ACTTAGTTGT TGGCTCACAT ATGCTGGAAG TCTGCCCGTC GATCGCCAAA GAAGAGAAGC CCCTGCTGGA TGTGCAACAC CTTGGCATTG GAGGGAAAGC TGACCCTGCC CGTTTGATTT TCTCTACCCC CGCAGGCCCG GCGCTGAATG CCAGTTTGAT CGATATGGGG AACCGTTTCC GCTTGCTGGT TAATGTGGTT GATACCGTTG AACAACCTCA TCCATTGCCA AAATTACCGG TTGCCCGGGC TATCTGGCAA GCACAACCTT CACTGGCAAC GGCTGCTGAA GCTTGGATCA TCGCCGGTGG CGCACACCAT ACGGTATTCT CACAAGCGGT GGGTGTCGAT GAACTGCGTT TATATGCCGA AATGCACGGT ATTGAATTCT TGTTGATCGA CAATGACACG ACGTTACCGG CGTTCAAAAA CGAAATCCGT TGGAACGAGG TGTACTACCA GCTCAATCGC TAA
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Protein sequence | MDVFKQSEVW FVIGSQNLYG PKTLQQVMDN AHQVVNSLNS EAGLPVKLVL KPLVTTPDEI TALCREANYD TACIGIMTWL HTFSPAKMWI GGLSILNKPL LQFHTQFNAQ IPWETMDMDF MNLNQTAHGG REFGFIGARM RQQHSVITGH WQDKEAHQRI GQWMRVAAAK QESQQLKVAR FGDNMREVAV TEGDKVAAQI QFGYSVNAYG IGDLVAVVDA VSKGDIDTLV EEYEATYRFS DAVKLNGDKR ENLLDAARIE LGMKRFLEQG GFKAFTTNFE NLYGLKQLPG LAVQRLMQQG YGFGGEGDWK TAALLRILKV MGTGLKGGTS FMEDYTYNFQ PGNDLVVGSH MLEVCPSIAK EEKPLLDVQH LGIGGKADPA RLIFSTPAGP ALNASLIDMG NRFRLLVNVV DTVEQPHPLP KLPVARAIWQ AQPSLATAAE AWIIAGGAHH TVFSQAVGVD ELRLYAEMHG IEFLLIDNDT TLPAFKNEIR WNEVYYQLNR
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