| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1885 |
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| Symbol | araF |
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| ID | 5384818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2184975 |
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| End bp | 2185958 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640864869 |
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| Product | L-arabinose ABC transporter, periplasmic L-arabinose-binding protein |
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| Protein accession | YP_001400860 |
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| Protein GI | 153948886 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.279994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAT TAACTAAGGC GCTGGCAGTA GTCGGGTTAG CGGCGGTTAT GTCACATTCA
GCTATTGCCG AAAGTATGAA ACTGGGCTTT CTGGTTAAGC AACCGGAAGA ACCTTGGTTC
CAGACTGAAT GGAAGTTCGC TGATAAGGCG GGTAAGGATT TAGGCTTTGA AGTGATCAAA
ATTGCCGTAC CTGATGGCGA GAAAACCCTG AACGCCATCG ACAGCCTGGC GGCCAGTGGT
GCCCAAGGTT TCGTTATTTG TACACCAGAT CCAAAGCTGG GGCCTGCCAT TGAAGCAAAA
GCGCGCAGTT ATAACCTGAA AGTGATTGCC GTTGATGACC AATTTGTGAA TGCCAAAGGC
AAACCGATGG AGAGTGTTCC GCTGGTGATG ATGGCAGCCA CTAAAATTGG TGAACGTCAG
GGGCAGGAGT TGTGGAAAGA GATGAACAAA CGGGGGTGGC AACCCGCTGA AACAGCAGTA
ATGGCGATCA CTTCTGATGA ATTAGATACC GCGCGTCGTC GTACCGGCGG TTCAATGGCG
GCTCTGCAAG CGTCTGGCTT CCCGGAAAAG CAAATCTATA AAGTTCCGAC TAAATCTAAT
GATATCCCCG GCGCATTTGA TGCTGCTAAC TCCATGCTAG TACAGCATCC AGAAGTGAAG
AATTGGCTGA TTGTCGGCAT GAACGACAAC ACCGTATTAG GTGGCGTGCG TGCAACCGAA
GGCCAAGGTT TTAAAGCACC GAATGTTATT GGCATTGGTA TCAACGGGGT TGATGCCGTG
AGCGAGCTGT CCAAAGGCCA GGCGACGGGT TTCTATGGCT CTTTGTTACC TAGCCCGGAT
ATCCATGGCT ATAAAAGTAT TCAGATGCTG CATGACTGGG TCACTAAAGA TGTCGAACCT
GCAAAATTTA CTGAAGTCAC CGATGTGGTG TTGATCACTC GGGATAACTT CAAAGCCGAG
TTAGAGAAGA AAGGCTTATT GTAA
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| Protein sequence | MHKLTKALAV VGLAAVMSHS AIAESMKLGF LVKQPEEPWF QTEWKFADKA GKDLGFEVIK
IAVPDGEKTL NAIDSLAASG AQGFVICTPD PKLGPAIEAK ARSYNLKVIA VDDQFVNAKG
KPMESVPLVM MAATKIGERQ GQELWKEMNK RGWQPAETAV MAITSDELDT ARRRTGGSMA
ALQASGFPEK QIYKVPTKSN DIPGAFDAAN SMLVQHPEVK NWLIVGMNDN TVLGGVRATE
GQGFKAPNVI GIGINGVDAV SELSKGQATG FYGSLLPSPD IHGYKSIQML HDWVTKDVEP
AKFTEVTDVV LITRDNFKAE LEKKGLL
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