Gene YpsIP31758_1874 details

Gene Information

• Locus tag: YpsIP31758_1874
• Symbol: manA
• ID: 5388470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 2171447
• End bp: 2172622
• Gene Length: 1176 bp
• Protein Length: 391 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640864858
• Product: mannose-6-phosphate isomerase, class I
• Protein accession: YP_001400849
• Protein GI: 153947728
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1482] Phosphomannose isomerase
• TIGRFAM ID: [TIGR00218] mannose-6-phosphate isomerase, class I

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.0430449
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAAA TGAATAACGC AGTTCAAAAC TATGCTTGGG GCAGTACTGA TGCCCTGACC 
CAGCTTTATG GCATACCTAA CCCACAAGGA ATGCCAATGG CTGAACTGTG GATGGGGGCG 
CACCCGAAAA GCAGTTCCCA GGTTCTTGAC GCAAATGGCC AGTGGCATTC ATTACGTGAT 
GTGATTGATC AAGATCCAGA TAACACGCTG GGGAGTGATA TTTTCAAGCG CTTTGGTGAA 
CTGCCATTCC TGTTCAAAGT ACTTTGTGCA GCTCAACCTC TATCGATTCA GGTTCACCCG 
AGCAAAGCGG CAGCAGAGGT CGGTTTTGCT AAAGAAAACC AGGCAGGTAT CCCACTGGAT 
GCGGCTGAGC GCAATTATAA AGATGCGAAC CATAAGCCTG AGCTGGTTTA TGCCCTCACC 
CCTTTTCAGG CAATGAATGG TTTTCGCACA CTAGAAGATA TCCAGGCGCT GTTACAACCA 
CTAGCAGCGG CACACCCTGA TATTGCCGCG TTCTTGCGCC AACCCGATAC TGAGCATTTA 
GCCAGTTTAT TTGCCAGCTT ACTCAGTATG AGCGGTGAGA CAAAAACGCG GGCACTCGGT 
ATTCTGAAAG CGGCATTGAA TAGCCAACTC GGAGAGCCTT GGGATACGAT CCGCAGCATT 
TCGTGTTTTT ATCCCGATGA CAGCGGGTTG TTCTCCCCAC TACTGCTTAA TGTCGTGACA 
TTGCAACCGG GTGAGGCCAT GTTCCTTTAT GCCGAAACAC CGCACGCTTA CCTCAATGGG 
GTTGCATTAG AGGTCATGGC AAACTCGGAT AATGTGTTGA GAGCCGGGCT AACGCCGAAG 
TTTATTGATA TTCCAGAGTT AATGTCCAAT CTGCAATTTA TCCCTAAACC GGCTAATGCC 
CTACTCACAA CACCAAAGCA GCAGGGTAAT GAACTGATAT TCCCTATTCC TGTCGAGGAC 
TTCGCTTTCT CACTGCATAC CTTGGTGGCT GAACCACACG TTCTGGCACA ACACAGTGCG 
GCAATTATTT TTTGTGTTGA AGGCTGTGCG GTGCTGAAAA AACAAGAGCA AGAAATTACG 
CTGCACCCTG GTGAGTCTTG CTTCATATCG GCTAAGGAAT CACCTGTAAC CGTGCAAGGG 
GTGGGTTCAA TTGCTCGTGT TTATAACGAG GTGTGA 

 

Protein sequence

MLKMNNAVQN YAWGSTDALT QLYGIPNPQG MPMAELWMGA HPKSSSQVLD ANGQWHSLRD 
VIDQDPDNTL GSDIFKRFGE LPFLFKVLCA AQPLSIQVHP SKAAAEVGFA KENQAGIPLD 
AAERNYKDAN HKPELVYALT PFQAMNGFRT LEDIQALLQP LAAAHPDIAA FLRQPDTEHL 
ASLFASLLSM SGETKTRALG ILKAALNSQL GEPWDTIRSI SCFYPDDSGL FSPLLLNVVT 
LQPGEAMFLY AETPHAYLNG VALEVMANSD NVLRAGLTPK FIDIPELMSN LQFIPKPANA 
LLTTPKQQGN ELIFPIPVED FAFSLHTLVA EPHVLAQHSA AIIFCVEGCA VLKKQEQEIT 
LHPGESCFIS AKESPVTVQG VGSIARVYNE V