| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1871 |
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| Symbol | |
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| ID | 5385841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2167277 |
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| End bp | 2168545 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640864855 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001400846 |
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| Protein GI | 153949397 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00512651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCCAG CATCAACAAA AAATGATGAT GACACTGTTT TCACTACGAT CCCTAAACTG
CCTCCCCTAA ATAAGCGTCC TTATATACAA CAAGGTACGC CAGAATTCAT CCGCGTTGCT
CTGGCTTTAT TTTCGGCGGG GTTAGCAACT TTCGCCCTGC TTTACTGCGT ACAACCTATT
TTGCCCATGT TGTCGCAGGA CTTTAGTACC TCTCCAGCGT CCAGCAGTTT GTCACTTTCG
ATAGCCACCG GGATGCTGGC GTTGGGTTTG ATGTTTACCG GCCCCCTTTC TGATGCGATA
GGCCGAAAAT CAGTCATGGT CGTGGCGTTG CTATTGGCCG CGGTTTGCAC AATAGTTTGC
TCTTTTATGA CCAGTTGGCA TGGGATTTTG CTAATGCGCG CATTGACCGG TCTATCCTTA
AGCGGAGTTG CCGCGGTGGC AATGACCTAT TTGAGTGAAG AGATCCATCC TAATTTTATT
GCGCTATCAA TGGGGTTGTA TATCAGCGGT AGTTCTATTG GTGGCATGAG TGGGCGTTTG
GTGGCTGGGG TATTAAGCGA TCTCTTTTCC TGGCGCGTAT CACTGCTAGT ACTCGGATTA
TTTGCTTTAG CTGCTGCTTG CTTGTTTTGG TTTATCCTCC CAGCGTCTAA ACACTTTCGT
GCAAGTTCAT TGCGCCCCAG AACGTTGTTA ATCAATTTTA AACTGCACTG GCGTGACTCC
GGCTTACCCC TACTATTTGC TGAAGGTTTT CTCATTATGG GGGGGTTCGT CACCTTATTT
AATTATATCG GCTATCGGTT ACTGGATGGG CCTTATTATC TCAGCCCGAC CATCGTAGGG
CTATTATCCA TTGTTTATTT AACGGGTTCT TATAGTTCAC CTAAAGCGGG TTCACTCAGT
AATCGCTACG GGCGAGGCCT AATTTTATTG GCCTCTATCG GTATGATGTT GGTTGGTGTT
GTGATCACCA GTTTTCCGTC AGTGATCATG ATTTTTATTG GTATGATGTT CGTTGCAGCA
GGATTCTTTG CCGCTCACTC CGTTGTCAGT AGCTGGGTTG GTTGCAGAGC ACGTCGTGCT
AAGGCACAAG CTTCGTCACT TTATCTGTTT TGTTACTATG CCGGTTCCAG CGTAGCCGGT
ACGTTAGGTG GCGTTTTTTG GTTACATTTA GGCTGGACAG GTGTTGTTGT TTTTATTACC
GCCCTTTTAG TTATCGCGTT GTTTATCGCT CAGCGATTAC GAAAGTTGGT AGGAACAGCC
AAGCGTTGA
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| Protein sequence | MAPASTKNDD DTVFTTIPKL PPLNKRPYIQ QGTPEFIRVA LALFSAGLAT FALLYCVQPI
LPMLSQDFST SPASSSLSLS IATGMLALGL MFTGPLSDAI GRKSVMVVAL LLAAVCTIVC
SFMTSWHGIL LMRALTGLSL SGVAAVAMTY LSEEIHPNFI ALSMGLYISG SSIGGMSGRL
VAGVLSDLFS WRVSLLVLGL FALAAACLFW FILPASKHFR ASSLRPRTLL INFKLHWRDS
GLPLLFAEGF LIMGGFVTLF NYIGYRLLDG PYYLSPTIVG LLSIVYLTGS YSSPKAGSLS
NRYGRGLILL ASIGMMLVGV VITSFPSVIM IFIGMMFVAA GFFAAHSVVS SWVGCRARRA
KAQASSLYLF CYYAGSSVAG TLGGVFWLHL GWTGVVVFIT ALLVIALFIA QRLRKLVGTA
KR
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