Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1828 |
Symbol | |
ID | 5388433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2113913 |
End bp | 2115304 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864812 |
Product | putative arginine/ornithine antiporter ArcD |
Protein accession | YP_001400803 |
Protein GI | 153949937 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.768875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAAGA AACTCGGTCT GACTGCGCTA ACGGCGCTGG TTCTTAGCTC AATGCTGGGA GCGGGTGTCT TTAGCCTGCC GCAAAACATG GCTGAAGTCG CCAGCCCTGC TGCTCTGCTC ATTGGCTGGA GTATTACTGG CATCGGGATC ATTTTCCTGG CCTTCGCCAT GTTGCTACTG ACTCGCCTAC GCCCTGATCT CGATGGCGGG ATATTTACCT ATGCTAAAGA AGGTTTTGGC GACCTCATCG GTTTTTTCTC TGCGTGGGGT TATTGGCTAT GTGCGGTGAT CGCTAACGTA TCTTACTTGG TGATTGTTTT TGCAGCACTG AGCTTTTTTA CCGATAAATC CGGCAGCATC ATTTTTGGTG AAGGTAACAC CTGGCAGGCA TTGTTGGGGG CATCATTCCT GTTATGGCTG GTTCACGCTT TGGTACTACG AGGGGTACAG ACTGCGGCCA GTATCAACTT GGCGGCAACA CTGGCAAAAC TGTTACCTAT TGGCGGCTTT ATTATTCTGG CCGGCATCGC ATTTAGCCTC GATACTTTTA GTATCGATTT CACTGGCTTA GCACTACACA CGCCGGTTTG GCAGCAAGTA AAAGATACCA TGCTGATTAC CTTATGGGTC TTTATCGGTG TCGAAGGTGC AGTGGTTGTC TCTGCCCGTG CACGCAACAA GAAAGATGTG GGCCGTGCCA CGATGCTAGC CGTAATTTCA GCCCTTAGCG TCTACCTGTT GATTACCTTA TTGTCACTCG GCGTGGTGCC TCGGGCGGAA TTAGCGGGTA TGCGTAATCC GTCAATGGCA GGCATTATGG TCGAAATGAT TGGCCCATGG GGAGAAATCA TTATCGCCAC CGGGCTGATT ATTTCTGTCT GTGGTGCTTA TCTTAGCTGG ACAATTATGG CCGCTGAAGT ACCGATGGTG GCAGCTAAAC ATGGCGCTTT CCCTAAAATA TTCCGTCACC AAAATAAAAA CAACGCGCCA GCTCAATCCT TATGGTTAAC CAACAGCGCG GTACAAGTTG CGCTGGTTTT GATTTGGCTG ACAGGCAGCA ATTACAATAC CTTACTGACA ATTGCCTCGG AAATGATTCT GGTGCCCTAT TTTCTCGTCG GCGCATTCTT ATTTAAAGTG GCATTAAAGC GGCAAGATTG GCGTTTGATT GTTGCTGCCA GCGGGGCTTG TTTGTACGGT TTATGGCTGA TTTATGCTGC TGGTTTAGTG TATTTACTGT TGTCTGTACT TTTGTATGCC CCAGGATTAT TGGTGTTTAT TTATGCTCGT AAGGGGCATG AAGGGCTGAG ATTGCTGAAT ACGGTTGAGC GGGCGGCGAT TTTCCTCGTG TTACTCGCCA CTATCCCAGC GACATGGTTG ATGATGCACT AG
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Protein sequence | MEKKLGLTAL TALVLSSMLG AGVFSLPQNM AEVASPAALL IGWSITGIGI IFLAFAMLLL TRLRPDLDGG IFTYAKEGFG DLIGFFSAWG YWLCAVIANV SYLVIVFAAL SFFTDKSGSI IFGEGNTWQA LLGASFLLWL VHALVLRGVQ TAASINLAAT LAKLLPIGGF IILAGIAFSL DTFSIDFTGL ALHTPVWQQV KDTMLITLWV FIGVEGAVVV SARARNKKDV GRATMLAVIS ALSVYLLITL LSLGVVPRAE LAGMRNPSMA GIMVEMIGPW GEIIIATGLI ISVCGAYLSW TIMAAEVPMV AAKHGAFPKI FRHQNKNNAP AQSLWLTNSA VQVALVLIWL TGSNYNTLLT IASEMILVPY FLVGAFLFKV ALKRQDWRLI VAASGACLYG LWLIYAAGLV YLLLSVLLYA PGLLVFIYAR KGHEGLRLLN TVERAAIFLV LLATIPATWL MMH
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