Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1825 |
Symbol | rstB |
ID | 5384726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2111126 |
End bp | 2112430 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864809 |
Product | sensor protein RstB |
Protein accession | YP_001400800 |
Protein GI | 153948550 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.213724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGC TATTTATTCA GTTTTTTTTG TTGTTATTCG TTTGCTTCAT GGTGATGGCG ATGCTGGTTG GCCTGGTTTA TAAGGTCACC GCTGAGCGCG CGGGTCGTCA GTCTTTAGAT GACCTGATGA AAAGTTCACT ATCACTGATG CGCAGCGAAT TGCGGGAGAT CCCGCTAAAA GACTGGAATA AAACCATCGC AACATTAGAT TTAAATCTTT CTTTTCAACT TCATATCGAA CCATTAGATA AACGTGATCT TGGCGCACAA TTGAACAAAC GGCTACGTGC GGGTGAAATT ATTGCATTGG ATGATGAATA TACCTTCCTG CAACGTATCC CTCGTAGCCA CTATGTTCTG GCGGTTGGCC CGGTCCCTTA TCTATTTTAT TTACACCAGA TGAGGCTGCT CGATTTAGCA TTATTAATCT TGATTGGCCT GTCGTTAGCT CTTCCGGTAT TTCTCTGGAT GAGACCGCAC TGGAAAGATC TTCTCAAATT AGAAAATGCC GCTCAGAGAC TGGGCTCAGG CCACCTTGAC GAGCGGACTC ATTTCGACCC CACTTCCAGT CTAAGCCGTT TAGGCGTGGC TTTTAACCAA ATGGCTGACA ACATCAACAC CCTGATTGTT AGCAAAAAAT TACTGATTGA TGGTATAGCA CACGAATTAC GGACACCATT GGTACGCTTA CGTTATCGAT TAGCGATGAG TGATAACCTG ACCGAAAGCG AACAGCAGGC GTTACATCAT GATATCGGTC AATTGGAAGC ACTTATTGAT GAACTACTGA CCTATGCACG TTTGGATCGC CCACAAGTTT CCCTCAATCT GGAACCTATC GACCTACCGG CCTGGCTAAC AACCAAAATC ATGGATATCC GCTCGATTCA TCAAGAGCGT GAGATCGAAC TTGATATTCC CCACCGTGGT GATTTTGGTG CCGTTGACCT GCGTCTGATG GAGCGAGTGC TGGATAACCT GGTCAATAAT GCCCTACGCT ATTCACATCA ACGGCTGCGC ATAGGGTTAT GGTTCGATGG CGATAACGCC TGCCTACAGG TTGAAGATGA CGGCCCCGGT ATCCCGCCAG AAGAACGGAC ACGAATTTTT GAACCCTTTG TTCGTTTAGA CCCCAGCCGT GATCGCGCCA CTGGTGGCTG TGGATTGGGG CTGGCCATTG TCCATTCGAT TGCACTGGCC TATCAAGGCA GTATCTCTGT CAATACCAGT CCATTAGGTG GGGCCAGTTT CCGCTTTAGT TGGCCGATAA AAACACATTT GCCTCTATCC GCTGATCAGA ATTAA
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Protein sequence | MRKLFIQFFL LLFVCFMVMA MLVGLVYKVT AERAGRQSLD DLMKSSLSLM RSELREIPLK DWNKTIATLD LNLSFQLHIE PLDKRDLGAQ LNKRLRAGEI IALDDEYTFL QRIPRSHYVL AVGPVPYLFY LHQMRLLDLA LLILIGLSLA LPVFLWMRPH WKDLLKLENA AQRLGSGHLD ERTHFDPTSS LSRLGVAFNQ MADNINTLIV SKKLLIDGIA HELRTPLVRL RYRLAMSDNL TESEQQALHH DIGQLEALID ELLTYARLDR PQVSLNLEPI DLPAWLTTKI MDIRSIHQER EIELDIPHRG DFGAVDLRLM ERVLDNLVNN ALRYSHQRLR IGLWFDGDNA CLQVEDDGPG IPPEERTRIF EPFVRLDPSR DRATGGCGLG LAIVHSIALA YQGSISVNTS PLGGASFRFS WPIKTHLPLS ADQN
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