Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1817 |
Symbol | |
ID | 5387618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2101289 |
End bp | 2101612 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640864801 |
Product | DNA-binding protein |
Protein accession | YP_001400792 |
Protein GI | 153950887 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.252724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CAGACGATTT TGACATCATT CCTTTTGCGG TGGTTAAAGC AGCAGCGTTG AGTCATCCGC AGGTGAATGA CGCCTATACG GATTTACAAA TTCGGCAAGC GATGATGACT GAACTGAAAG CGGCCCGCCA ACAATGCAAT TTGACTCAAG AAGAGGTCGC ACTGCGGGCG GGGCTGAAAA AACAAAATAT CAGTCGTATG GAGAAAGGCA TTATTTCACC TAACCTCACC ACCTTGAGCC GTTATGCCGC AGCACTAGGA GGGACTTTCG TTTTTCAATT CAACCCAAAC TCATCTTATG CGACTAAGGA GTAA
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Protein sequence | MKKTDDFDII PFAVVKAAAL SHPQVNDAYT DLQIRQAMMT ELKAARQQCN LTQEEVALRA GLKKQNISRM EKGIISPNLT TLSRYAAALG GTFVFQFNPN SSYATKE
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