Gene YpsIP31758_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1817 
Symbol 
ID5387618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2101289 
End bp2101612 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID640864801 
ProductDNA-binding protein 
Protein accessionYP_001400792 
Protein GI153950887 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.252724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAGACGATTT TGACATCATT CCTTTTGCGG TGGTTAAAGC AGCAGCGTTG 
AGTCATCCGC AGGTGAATGA CGCCTATACG GATTTACAAA TTCGGCAAGC GATGATGACT
GAACTGAAAG CGGCCCGCCA ACAATGCAAT TTGACTCAAG AAGAGGTCGC ACTGCGGGCG
GGGCTGAAAA AACAAAATAT CAGTCGTATG GAGAAAGGCA TTATTTCACC TAACCTCACC
ACCTTGAGCC GTTATGCCGC AGCACTAGGA GGGACTTTCG TTTTTCAATT CAACCCAAAC
TCATCTTATG CGACTAAGGA GTAA
 
Protein sequence
MKKTDDFDII PFAVVKAAAL SHPQVNDAYT DLQIRQAMMT ELKAARQQCN LTQEEVALRA 
GLKKQNISRM EKGIISPNLT TLSRYAAALG GTFVFQFNPN SSYATKE