Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1805 |
Symbol | |
ID | 5387808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2086331 |
End bp | 2086990 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640864789 |
Product | putative Mg(2+) transport ATPase |
Protein accession | YP_001400780 |
Protein GI | 153949404 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTG ATTTATTGTT ACGAATTACC CTAGCGGGGA TTTTAGGTGG GTTAATTGGT CTTGAACGTC AATTACGGGC AAAAGAAGCT GGATTACGTA CCCATATTTT AGTCGGTATT GGTAGTGCCA TGTTTATGAT CGTCTCTAAA TATGGTTTTG AAGATTTATT GGTCTTAGAA CACGTCAGTT TTGACCCCAG TCGAGTCGCC GCACAGGTGG TCAGTGGTAT GGGTTTTCTT GGTGCCGGTA CCATTATGAT TCAAAAACAA ATGGTCAAAG GGCTGACAAC TGCTGCCGGG ATGTGGGTTA CGGCGGCTAT CGGTCTGGTT ATCGGAAGCG GCCTGTATGA AATTGGTATC TATGGCACCT TGATGACCTT AGTGGTGCTG GAAGTCTTCC GCCAATTAAG CCAGCGCTTA CTCGGGCAGC ATTATTATAT TGTCGTCAAG TTACTCCCTG AAAGCGTCCC ATTGGTGTTG GTTGCACTGC AAAAATTGCA TTTACAGCCC ATGAATCTCT CGGTGACACA AAACCATAAA AGCGATAATA CTAGCAGTGA ATTAACGATG GAAGTGACGT TGTCACCCAA AAAGACGGTA AATCAGGTTT ATGAACAATT ATTAGCTATT GAGGGAATAC ATCAGTTAGA TATTAAGTAG
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Protein sequence | MITDLLLRIT LAGILGGLIG LERQLRAKEA GLRTHILVGI GSAMFMIVSK YGFEDLLVLE HVSFDPSRVA AQVVSGMGFL GAGTIMIQKQ MVKGLTTAAG MWVTAAIGLV IGSGLYEIGI YGTLMTLVVL EVFRQLSQRL LGQHYYIVVK LLPESVPLVL VALQKLHLQP MNLSVTQNHK SDNTSSELTM EVTLSPKKTV NQVYEQLLAI EGIHQLDIK
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