Gene YpsIP31758_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1796 
Symbol 
ID5387792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2072896 
End bp2073870 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content52% 
IMG OID640864780 
Productmandelate racemase/muconate lactonizing family protein 
Protein accessionYP_001400771 
Protein GI153946953 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAG TGCGTTTTTA CCCAGAGGCC TGGCCTCTTC ACTCCGCGTT TGTCATTTCC 
CGAGGCAGCC GCACTGAAGC TAAAGTTATC GTTGTTGAAA TTGAGGAGAA CGACATTCAT 
GCATTCGGTG AATGTACTCC ATACCCGCAT TATGGAGAAA GTGAATCTTC AGTGATGGCA 
CAGCTTGCTT TGGTGGCTAA TGCTATTGAG AATGGCATCT CGCGGGAAGC CTTACAGCCA 
CTTTTACCGG CCGGAGCGGC GAGGAATGCC GTCGATTCTG CGTTATGGCA ACTGGAGTGT 
TTGCAACATC AGCAAAGTTT ATGGCAACGA AGCCAGATAA CGGCAGTTGA AACCGTTGCC 
ATGGCTCAGA CTGTCAGTAT TGGTACTCCG GAAGCCATGG CATGCAGTGC CAAAGCATTG 
GTGCAGCTTG GGGCCCACTT GCTGAAAGTC AAACTTGATG AGCACCTGAT CGCCGAACGC 
TTGGTTGCGA TACGCAGTGC GGTGCCAGAG GTAACGTTAA TCGTTGATGC TAATGAGGCT 
TGGCAACCTG AAGGGCTGGC AGCGCGTTGC CAATTACTTG CTGACTTGGG GGTGGTGATG 
CTAGAACAGC CGCTACCCGC AGGAGAAGAC AGTAGTTTAC AGAATTTCAT CCATCCATTA 
CCCCTCTGTG CGGATGAAAG CTGTCACACG CGGGCTGATT TAGCGGGTTT GGTGGGTCGC 
TATGACATGG TAAACATCAA ACTGGATAAA AGTGGTGGGC TGACCGAGGC ACTGCTACTG 
GCTGAACAGG CTAAATCGAT GGGCTTTGCC ATTATGCTCG GCTGTATGCT GTGTACCTCT 
CGTGCCATCC GTGCGGCACT GCCCTTAGCA CCGGGGGCGC GTTTTATTGA TTTAGATGGC 
CCGACCTGGT TGGCAAATGA CGTAGAGGGG GGACTGCATT TTTCTACTGG TACGATAGAC 
CTACGGGTAC GCTAG
 
Protein sequence
MRTVRFYPEA WPLHSAFVIS RGSRTEAKVI VVEIEENDIH AFGECTPYPH YGESESSVMA 
QLALVANAIE NGISREALQP LLPAGAARNA VDSALWQLEC LQHQQSLWQR SQITAVETVA 
MAQTVSIGTP EAMACSAKAL VQLGAHLLKV KLDEHLIAER LVAIRSAVPE VTLIVDANEA 
WQPEGLAARC QLLADLGVVM LEQPLPAGED SSLQNFIHPL PLCADESCHT RADLAGLVGR 
YDMVNIKLDK SGGLTEALLL AEQAKSMGFA IMLGCMLCTS RAIRAALPLA PGARFIDLDG 
PTWLANDVEG GLHFSTGTID LRVR