Gene YpsIP31758_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1791 
Symbol 
ID5388281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2068118 
End bp2069179 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content52% 
IMG OID640864775 
Producthypothetical protein 
Protein accessionYP_001400766 
Protein GI153950068 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC CGTTAAAGCC ACGGATTGAT TTTGAGCAGC CTCTGCAATC GTTGGATGAA 
CCGGTATTAA AATCGGCGCA GGCTTTTGAT GAACAGGCGG CGGAGAAGTT CTATCCAGCG
GCCCAGGAAT TGGATGCAGA AGATGAAGAG GGGCGTGTAG AAGGGTTGGT GAATGCTGCG
TTGAAACCTA AGCGTAGCCT GTGGCGTAAG ATGGTCACTG CCGGGATGGT TATCTTGGGG
GCCAGTGTGA TTGCCCAGTC AGTGCAATGG GTTAATCAAG CCTGGCAGCA GCAAGATTGG
ATCGCTTTGG GCGCCACTAC GGCAGGGGGG CTAATTATTC TGGCAGGTGT CGGCTCGGTG
GTGACGGAAT GGCGGCGTTT ATATCATTTA CGCCAACGGG CTGAAGAGCG TGATATTGCT
CGGGCGTTAT TGGTCAGCCA CGGTGTTGGT CAAGGGCGTG TTTTCTGTGA GAAATTAGCC
CGTCAGGCAG GGCTGGACCA AGGGCACCCG GCATTGCAGC GCTGGCAGGC ATCACTGCAT
GAAACGCATA ATGATCGTGA AGTGGTTGAA TTGTACGCCA AACTGGTTCA ACCCGCGCTG
GATAATCAGG CTCGGGCAGA AATCAGCCGC TATGCTGCTG AATCAGCGTT GATGATCGCC
GTCAGCCCTC TCGCGCTAGT GGATATGGCT TTTATTGCCT GGCGTAACAT TCGTCTCATT
AATCGTATTG CTGCACTGTA TGGTATTGAA TTAGGGTATT TCAGCCGTAT CCGTCTGTTC
CGTCTGGTAT TGCTGAATAT TGCCTTTGCC GGCGCCTCTG AGTTGGTACG GGAGGTGGGC
ATGGATTGGC TATCACAAGA TTTGGCTGCT CGTTTGTCAG CGCGAGCGGC TCAAGGAATT
GGCGCTGGGT TATTGACCGC GCGCTTGGGG ATCAAAGCCA TGGAGCTATG CCGCCCGTTA
CCGTGGTTAG AGGGCGATAA ACCCAAACTG GGTGATTTCC GCCGCCAGTT GATGAATCAA
CTGAAAAATA CGTTACCGAA AAAAGATAAA ACAGCACATT AA
 
Protein sequence
MSEPLKPRID FEQPLQSLDE PVLKSAQAFD EQAAEKFYPA AQELDAEDEE GRVEGLVNAA 
LKPKRSLWRK MVTAGMVILG ASVIAQSVQW VNQAWQQQDW IALGATTAGG LIILAGVGSV
VTEWRRLYHL RQRAEERDIA RALLVSHGVG QGRVFCEKLA RQAGLDQGHP ALQRWQASLH
ETHNDREVVE LYAKLVQPAL DNQARAEISR YAAESALMIA VSPLALVDMA FIAWRNIRLI
NRIAALYGIE LGYFSRIRLF RLVLLNIAFA GASELVREVG MDWLSQDLAA RLSARAAQGI
GAGLLTARLG IKAMELCRPL PWLEGDKPKL GDFRRQLMNQ LKNTLPKKDK TAH