Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1784 |
Symbol | sapA |
ID | 5385776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2061507 |
End bp | 2063150 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864767 |
Product | peptide ABC transporter, periplasmic peptide-binding protein |
Protein accession | YP_001400759 |
Protein GI | 153947401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGGTT TACTGATTTT GCTGTTGTCG CTGATTTGCC TTGCAACCCC TGTGCTGGCA CAACCTGTTG CAGCGGAGCA ACCGCTACCG GATATCCGTC AGCGCGGATT TGTCTATTGT GTCAGTGGGA TACTCAACAC ATTTAACCCC CAAATGGCCA GTAGCGGTTT AACCGTCGAT ACACTTGCAG CACAACTCTA TGACCGTCTA CTGGATGTTG ACCCCTATAC CTACCGGTTA ATCCCAGAAC TGGCGGAAAG TTGGCAAGTT CTGGATAACG GCGCAACCTA CCGTTTTCAT TTACGTAAAG ATGTGCCATT TCAGACTACC GACTGGTTTA CGCCTACGCG GATGATGAAC GCCGATGATG TGGTCTTCAG TTTTCAGCGA GTATTTGACT CAAAGCATCC GTACCACAAG GTCAACGGCG GAGAGTACCC CTACTTTGAT AGTTTGCAGT TTGCAAGCGC CGTAAAAAGC GTAAAAAAAT TGGATGATTA CACCGTTGAA TTTAAGCTAA AAGCCCCAGA TGCGTCGTTT CTTTGGCATT TAGCAACTCA TTACGCCCCC GTATTGTCTT CAGAATACGC CGATGTCCTG ACCCAGAAAG GGAAGGAAGA ACAGATTGAC CGTGAGCCAG TCGGGACCGG GCCTTTTCTA TTGGATGAAT ATCGTTCTGG GCAATATATC CGCTTGTTCC GCAACAGCCA CTATTGGAAA GGTGTGCCAC GTATGCCACA GGTGGTTATC GACTTAGGGG TCGGTGGAAC GGGGCGTTTA TCAAAACTGT TGACCGGAGA GTGTGATGTG CTGGCCTATC CCGCCGCCAG CCAATTATCT ATTTTACGTG ATGACCCACG CCTACGCCTG ACACTGCGCC CAGGGATGAA CGTCGCCTAT CTCGCCTTCA ATACCCGCAA GCCCCCGTTA AGTGATCAAC GGGTTCGCCA AGCGATCGCT TTGTCGATCA ATAACCAACG ATTGATGCAA TCAATCTATT ACGGCACAGC TGAAACGGCA GCCTCTATTT TACCTAGAGC ATCATGGGCT TATGATAATC AGGCGCAGGT GACCGAATAT AATCCGGAAA AAGCCAAAGA GATCCTCAAA GATTTGGGGA TAACCCAACT GCAACTTAAC TTATGGGTCC CTACTGCATC GCAATCTTAT AATCCTAGCC CATTGAAAAC TGCTGAATTG ATCCAAGCGG ATTTAGCACA AGTGGGGATT TCCGTCACTA TTGTTCCCGT CGAGGGCCGT TTCCAAGAGG CCCGTCTGAT GGAGATGAAC CACGATCTGA CACTTTCCGG TTGGTCTACT GACAGTAATG ACCCCGACAG TTTCTTCCGG CCATTATTAA GCTGTGCAGC AATTCGTTCG CAAACAAACT ATGCTCACTG GTGTGATCCG GCCTTTGATG AATTACTGCA AAAGGCATTA CGTTCCCAAC AATTATCGGA GCGTATTGAG TATTATCAGC AGGCTCAGCG TATTCTGGAG CAACAATTGC CGTTACTGCC ACTGGCATCG TCCCTGCGGC TTCAGGCATA CCGTTATGAC ATTAAAGGCT TGGTATTAAG CCCGTTCGGT AACTCTTCTT TCGCCGGTGT ATACCGCGAA AGCGATGAGG GCAAGACGCC ATGA
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Protein sequence | MRGLLILLLS LICLATPVLA QPVAAEQPLP DIRQRGFVYC VSGILNTFNP QMASSGLTVD TLAAQLYDRL LDVDPYTYRL IPELAESWQV LDNGATYRFH LRKDVPFQTT DWFTPTRMMN ADDVVFSFQR VFDSKHPYHK VNGGEYPYFD SLQFASAVKS VKKLDDYTVE FKLKAPDASF LWHLATHYAP VLSSEYADVL TQKGKEEQID REPVGTGPFL LDEYRSGQYI RLFRNSHYWK GVPRMPQVVI DLGVGGTGRL SKLLTGECDV LAYPAASQLS ILRDDPRLRL TLRPGMNVAY LAFNTRKPPL SDQRVRQAIA LSINNQRLMQ SIYYGTAETA ASILPRASWA YDNQAQVTEY NPEKAKEILK DLGITQLQLN LWVPTASQSY NPSPLKTAEL IQADLAQVGI SVTIVPVEGR FQEARLMEMN HDLTLSGWST DSNDPDSFFR PLLSCAAIRS QTNYAHWCDP AFDELLQKAL RSQQLSERIE YYQQAQRILE QQLPLLPLAS SLRLQAYRYD IKGLVLSPFG NSSFAGVYRE SDEGKTP
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