| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1781 |
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| Symbol | sapD |
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| ID | 5385557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2058676 |
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| End bp | 2059668 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640864764 |
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| Product | peptide ABC transporter, ATP-binding protein SapD |
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| Protein accession | YP_001400756 |
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| Protein GI | 153950812 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAC TTGATATTCG CAACCTTACC ATCGAATTTA TGACGTCAGA AGGGCCAGTA
AAAGCCGTTG ACCGCATCAG CATGACCTTA ACTGAGGGCG AAGTTCGTGG CTTAGTCGGT
GAGTCTGGGT CCGGTAAAAG TTTGATAGCC AAAGCTATCT GCGGTGTCAG CAAGGATAAC
TGGCGCATTA CTGCTGACCG CTTTCGCTTT AACGACATTG ATTTACTCCA ACTGACTCCC
CGTCAGCGGC GTAAGGTGAT CGGCCATAAT ATTTCTATGA TTTTTCAGGA GCCGCAATCT
TGCCTCGATC CATCAGAAAG TATTGGCCTG CAACTGATAC AAGCGATCCC TGGCTGGACA
TATAAAGGCC GCTGGTGGCA GCGTTTTCAT TGGCGTAAAC GGCGGGCAAT CGAGTTATTG
CATCGGGTTG GTATCAAAGA TCACAAAGAC ATTATGCACA GTTACCCCTA CGAGCTAACC
GAAGGTGAGT GTCAAAAGGT GATGATTGCT ATCGCGCTGG CAAATCAGCC ACGGTTGCTG
ATCGCCGATG AACCCACCAA TGCGATGGAA CCCACGACAC AAGCACAGAT TTTTCGCCTG
TTGGCCCGGT TAAATCAGAA TAACAACACC ACGATTTTGT TGATCAGTCA CGATTTACAG
ATGATGAGTA AATGGGCAAC CCGGGTTAAC GTACTTTATT GTGGTCAGAC GGTAGAAAGC
GCCGTCTGTG AAGACTTACT GTCTACCCCA CATCACCCTT ATACCCAAGC ACTGATTCGT
GCAATGCCTG ATTTTGGCCG ATCCCTGCCC CATAAAAGTC GCCTGAATAC GTTGCCGGGT
GCTATCCCAT CGCTGGAACA TTTACCGGTC GGTTGCCGTC TTGGCCCACG TTGCCCTTAC
GCTCAGAAAA CCTGTATTGA AACACCGCGC TTGCGGCTGG TGAAAAACCA CGCCTTTGCC
TGTCATTTCC CCTTAAATCT GGAGGAGCAA TAA
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| Protein sequence | MPLLDIRNLT IEFMTSEGPV KAVDRISMTL TEGEVRGLVG ESGSGKSLIA KAICGVSKDN
WRITADRFRF NDIDLLQLTP RQRRKVIGHN ISMIFQEPQS CLDPSESIGL QLIQAIPGWT
YKGRWWQRFH WRKRRAIELL HRVGIKDHKD IMHSYPYELT EGECQKVMIA IALANQPRLL
IADEPTNAME PTTQAQIFRL LARLNQNNNT TILLISHDLQ MMSKWATRVN VLYCGQTVES
AVCEDLLSTP HHPYTQALIR AMPDFGRSLP HKSRLNTLPG AIPSLEHLPV GCRLGPRCPY
AQKTCIETPR LRLVKNHAFA CHFPLNLEEQ
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