| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1779 |
|---|
| Symbol | |
|---|
| ID | 5384972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2056191 |
|---|
| End bp | 2057471 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640864762 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001400754 |
|---|
| Protein GI | 153948117 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4950] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAAT TTCGCAGGAG AAATAATGCC CATTGGTATC ATGAGACTCA GTGTAGCGGC
AGCCTGGAGC ATTGTAGCGG TAGCCCAGTG AATATTTCCA CGACAGTGAA TGTTCCCACG
ACAGTGAATA ATGAAAACCC CCCTGTTGAT ATTCGGCCAC GTGATCCCAG CGAGAGTGAC
AACATGAGCA CTGGCAGTAA TATAACTGAA CAGAGCATCA TAACTGAACA GGGCATCTTT
CTACTTGGCG TGACAGAAAA CATCGCTCCT ACATTACAAG ACACCCTCTA CCATGAGCAG
CCTATTCTTA CTGCCTCCGA CGCCATGTAT CAGGCCCTGT TCCCAACGAT TATCGAGATC
AACCACACCA ATACCTTCTC ACTTTATGAT CGGTTAAGTA CTGCGCTGAC GGTCGCTCAG
GTTACCGGGA TTCAGCGGCT ATGTAGCCAC TATGCTCTCC GTCTCGCGCC GCTCCCCAGC
CCGGATGCCT CAAGGGAAAG CAATATTAGG CTAACGCAAA TTACGCAATA TGCCCGCCAA
TTGGCCAGCC AACCTACGTT GATCGATAGG CATGCTTTAG CGCAATTGCA TGACGTGGGT
TTAACTGATA GCGATATCAT TATTTTATCG CAAATTATTG GATATGTGGG ATATCAAGCC
CGAGTGGTCG CTGGCATCTC TGCACTGGCT GGTTACCCTA CCGTGATGCT CCCCGGTTTC
CCCCGCATGG AAGATGCCGC CCCCAACCCA TTACCAGATG TCATGCCCAA TTGGCAAGGT
TGGCTACCGT CTCATGCGGC AAACGACGAT CAATCCGATA AAGAACCTGA CGAAACGGCC
AGCACACTGA CTGAACTGTT GGGCCATCAC CAGCAAAGTT TGCTCGCTTA TCACGCCATT
ACCACTCACC AGCCCAACTC ACCTCAATTG CAACGTGACT GGCTGGAACT GGTGGCATTG
GTCAGCGCAC GAATCAATGG CAGCCTCTAC TGCCAAGCCC GTCACAGGCA ACATTTACAG
CAACTGACGG AGCAGCCCCT GTTGGTCACT GAGCTGTTAA AAGGGATTGA TCACGCGTTA
TTCTTGTTAC CCGAACAACA AATACCCCAT CAGCTAATCA GTGTAACCGC CGAGCTCACT
CGCGCCCCGG AACGCTTTAA TCATCAGCAT GTTAAACGTC TACAGACCCT TGGCGTCAGT
GATACTCAAG TCATGCGTAT TATTTTCAGT ATCGCCATTA CTGGTTGGAC CAACCGCCTA
CGACATACGT TAGGAAAATA G
|
|---|
| Protein sequence | MVQFRRRNNA HWYHETQCSG SLEHCSGSPV NISTTVNVPT TVNNENPPVD IRPRDPSESD
NMSTGSNITE QSIITEQGIF LLGVTENIAP TLQDTLYHEQ PILTASDAMY QALFPTIIEI
NHTNTFSLYD RLSTALTVAQ VTGIQRLCSH YALRLAPLPS PDASRESNIR LTQITQYARQ
LASQPTLIDR HALAQLHDVG LTDSDIIILS QIIGYVGYQA RVVAGISALA GYPTVMLPGF
PRMEDAAPNP LPDVMPNWQG WLPSHAANDD QSDKEPDETA STLTELLGHH QQSLLAYHAI
TTHQPNSPQL QRDWLELVAL VSARINGSLY CQARHRQHLQ QLTEQPLLVT ELLKGIDHAL
FLLPEQQIPH QLISVTAELT RAPERFNHQH VKRLQTLGVS DTQVMRIIFS IAITGWTNRL
RHTLGK
|
|---|
| |