Gene YpsIP31758_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1771 
Symbol 
ID5384324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2048243 
End bp2048560 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content42% 
IMG OID640864754 
Productputative lipoprotein 
Protein accessionYP_001400746 
Protein GI153947647 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0555699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAT ATCTATTTGC AGCAACAGTA CCGTTGCTGT TGGCAGGGTG CAGCTTGCTT 
CAATCGATGA ATGGCACGTC GGTGAATGAA ACGCTACATT ATCAGTGTGG TACCACAAAA
CTGACGGTGA CTCAGAACAA TAAGCAGGAT AACGTTAGTT TTATCATGGA TGGCAAACAA
TTAACGCTAC CACAAGTCCG TGCTGCATCA GGGGCCAAAT ACAGTGATGG TCATTATACT
TTCTGGTCGA AGGGTGATAG TGCATTTATT GAGCGCGAGG AGAAAGTCAT CATTAATGAT
TGTGTTTTGA TCAAGTAA
 
Protein sequence
MMKYLFAATV PLLLAGCSLL QSMNGTSVNE TLHYQCGTTK LTVTQNNKQD NVSFIMDGKQ 
LTLPQVRAAS GAKYSDGHYT FWSKGDSAFI EREEKVIIND CVLIK