Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1769 |
Symbol | pcp2 |
ID | 5384736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2046053 |
End bp | 2046520 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640864752 |
Product | outer membrane lipoprotein Pcp |
Protein accession | YP_001400744 |
Protein GI | 153950538 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.000141648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGC CATTCGTCGC CGTTGCTATC GCTGTTGTTA CTCTGACCGG TTGCGCTAAC AACAACACCT TATCAGGTGA TGTGTTCACC GCATCCCAGG CTAAGCAAGT ACAGACGGTG AGTTACGGCA CATTGATTTC TGTTCGCCCG GTAACTATTC AGGGTGGTGA TGATAACAAC GTAGTCGGTG CCATCGGTGG TGCTGTATTA GGTGGTTTCC TTGGTAATAC TGTTGGTGGT GGTACAGGCC GTAGCTTGGC AACCGCAGCA GGCGCTGTTG CCGGCGGTAT TGCAGGGCAA GGCGTTCAGG GAGCACTGAA CCGTACTGAT GGTGTGCAAC TGGAGATCCG TAAAGACGAC GGCCAAACCA TTCTGGTCGT TCAGAAGCAA GGCCCAACTC AGTTCAGCGT CGGTCAACGT GTCATGCTCG CCAATAGCGG CAGCACAATA ACCGTCAGCC CGCGTTGA
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Protein sequence | MIKPFVAVAI AVVTLTGCAN NNTLSGDVFT ASQAKQVQTV SYGTLISVRP VTIQGGDDNN VVGAIGGAVL GGFLGNTVGG GTGRSLATAA GAVAGGIAGQ GVQGALNRTD GVQLEIRKDD GQTILVVQKQ GPTQFSVGQR VMLANSGSTI TVSPR
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