| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1759 |
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| Symbol | rnt |
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| ID | 5388350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2036854 |
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| End bp | 2037501 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864742 |
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| Product | ribonuclease T |
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| Protein accession | YP_001400734 |
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| Protein GI | 153949552 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000000523182 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGACA AAAGTGACCT TAACGCCCTG AGTGGCCGTT TTCGTGGGTA TTACCCAGTA
GTAATTGATG TAGAAACCGC AGGTTTTAAT GCCCAAAGTG ATGCATTACT CGAGATTGCC
GCAGTAACCT TGCAGATGAA TAAAGAGGGC TGGCTGCTAC CTGATGAAAC GTTGCACTTC
CATGTGGAAC CTTTCGAAGG TGCCAACCTG CAGCCAGAGG CGCTGGCCTT TAATGGGATC
GATCCAACAA ATCCTCTACG CGGTGCCGTC AGCGAACATG ATGCCTTGCA TGCCATTTTT
AAAGCCGTGC GTAAGGGAAT CAAAGATAAA GGCTGTAACC GGGCCATAAT CGTGGCACAC
AATGCCAATT TTGATCACAG CTTTGTTATG GCTGCCGCTG AACGTGCCAG CTTGAAGCGG
AACCCGTTCC ACCCGTTTGC CACTTTCGAT ACCGCCGCTC TCAGTGGGTT GGTATTGGGG
CAAACCGTGC TGGCAAAAGC TTGCCTGGCC GCAGGTATCC CGTTTGACAG TAGTCAGGCG
CACTCTGCAT TGTACGACAC CCTGCAAACG GCGAAACTAT TTTGTGAGTT GGTTAATCGC
TGGAAAAAAC TGGGTGGCTG GCCGTTGCCA GCGGCAGAAT CGGAGTAA
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| Protein sequence | MADKSDLNAL SGRFRGYYPV VIDVETAGFN AQSDALLEIA AVTLQMNKEG WLLPDETLHF
HVEPFEGANL QPEALAFNGI DPTNPLRGAV SEHDALHAIF KAVRKGIKDK GCNRAIIVAH
NANFDHSFVM AAAERASLKR NPFHPFATFD TAALSGLVLG QTVLAKACLA AGIPFDSSQA
HSALYDTLQT AKLFCELVNR WKKLGGWPLP AAESE
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