| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1756 |
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| Symbol | sodB |
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| ID | 5386397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2033963 |
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| End bp | 2034541 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640864739 |
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| Product | superoxide dismutase |
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| Protein accession | YP_001400731 |
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| Protein GI | 153948255 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0605] Superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0000049091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTTTG AATTACCTGC ATTACCTTAC GCGCAAAATG CGCTGGAACC CCACATCTCT
GCCGAAACGC TGGAATACCA TTATGGTAAG CACCACAACA CCTATGTGAA CAACCTCAAT
AATCTGATTA AAGATACTGA GTTTGCAGGC AAATCACTGG AAGAGATCGT GAAAACCGCC
AATGGCGGTG TGTTTAATAA TGCGGCCCAA GTTTGGAACC ATACCTTCTA CTGGCATTGC
CTGTCGCCAA ATGGAGGCGG TGAACCTACT GGAAAAATCG CCGAGGCCAT TAATAAGTCT
TTTGGCTCAT TTGCTGAATT TAAAGCGCAA TTTACTGATG CTGCCGTGAA AAACTTCGGC
GCTGGTTGGA CGTGGCTCGT TAAAAAAGCG GATGGGACAT TGGCGATTGT CAGTACCTCT
AACGCAGGAA CACCGCTGAC AACAACAGAT AAACCCCTGT TGACCGTCGA TGTGTGGGAA
CATGCTTACT ATATTGATTA CCGTAATGCA CGACCAAAAT ATCTGGAGAA TTTCTGGGCA
TTAGTTAACT GGTCTTTCGC TGAGAAAAAC CTAGACTGA
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| Protein sequence | MSFELPALPY AQNALEPHIS AETLEYHYGK HHNTYVNNLN NLIKDTEFAG KSLEEIVKTA
NGGVFNNAAQ VWNHTFYWHC LSPNGGGEPT GKIAEAINKS FGSFAEFKAQ FTDAAVKNFG
AGWTWLVKKA DGTLAIVSTS NAGTPLTTTD KPLLTVDVWE HAYYIDYRNA RPKYLENFWA
LVNWSFAEKN LD
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