Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1754 |
Symbol | |
ID | 5384383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2031376 |
End bp | 2032308 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864737 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_001400729 |
Protein GI | 153950182 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.000500899 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTCAG AATATTCTCT GAATGTGGTC GATGCGGTCG CACGCACTGG CAGCTTTAGT GCGGCAGCAC AAGAATTGCA CCGTGTGCCT TCAGCGGTGA GTTATACCGT TCGGCAATTA GAAGACTGGC TTGCGGTTCC TCTGTTTGAA CGACGTCATC GTGATGTGGA ACTGACGGAG GCGGGTGTCG TTTTTCTTAA AGAAGCCCGC GATGTTATCA AAAAAATGAA TGACACGCGT CGTCAGTGCC AGCAAGTTGC GAATGGCTGG CGCGGGCAGT TAAACATTGT GGTAGATAAA ATCGTCAAAC CTCAGCGCAG CCGCCGTTTA GTGTTAGATT TTTACCGTCA TTTTCCTGAT GTTGAATTAC GTGTGCGTTA TGAGGTTTTT AATGGGGTTT GGGATGCACT GAGCGATGGC CGTGCGGATA TTGCCATAGG GGCGACCCGT GCCATCCCAG TGGGTGGGCG TTTTGTCTTT CGTGATATGG GCTTTCTTAG CTGGCTATGT GTTGTGAGTG TCGATCACCC ATTAGCGTTA CTATCAGGGC CGTTAAGCGA TGAACAATTG CGGCCTTATC CCTCACTTTG TCTGGAAGAC ACGGCACTCA ATTTACCCAA GCGGGATACA TGGACGCTAG ATAACCAGCA ACGATTGGTT GCACCGGATT GGTCAACAGG AATCGATTGT TTGTGTGCGG GACTGTGTAT GGGCATGGTG CCCGCCCATA TGGTATCGCC CTTGATTGCA CAGGGAAAAT TAGCGGCGAT CACGTTGGCA GAGCCGTTAC CCGATAGCCC GTGCTGTCTG ACATGGGAGC AGAATAATCA CTCTCCCGCA CTGGCTTGGT TACTTGATTA TCTAGGTGAC AGTGTCACGC TAAATACTGA GTGGTTAAGG GATGATAGCC AGCAATTGAT AGCAAACAAT TGA
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Protein sequence | MWSEYSLNVV DAVARTGSFS AAAQELHRVP SAVSYTVRQL EDWLAVPLFE RRHRDVELTE AGVVFLKEAR DVIKKMNDTR RQCQQVANGW RGQLNIVVDK IVKPQRSRRL VLDFYRHFPD VELRVRYEVF NGVWDALSDG RADIAIGATR AIPVGGRFVF RDMGFLSWLC VVSVDHPLAL LSGPLSDEQL RPYPSLCLED TALNLPKRDT WTLDNQQRLV APDWSTGIDC LCAGLCMGMV PAHMVSPLIA QGKLAAITLA EPLPDSPCCL TWEQNNHSPA LAWLLDYLGD SVTLNTEWLR DDSQQLIANN
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