Gene YpsIP31758_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1750 
SymbolmdtK 
ID5385365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2025923 
End bp2027296 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content51% 
IMG OID640864733 
Productmultidrug efflux protein 
Protein accessionYP_001400725 
Protein GI153949438 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000919244 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAAGT ATATAGTTGA AGCGCGTAGC TTGTTGGCTC TCGCTATTCC CGTTGTCATC 
GCGCAACTGT CTCAAACCGC TATGGGTGTT GTTGACACGA TCATGGCCGG CTCTGTCAGT
GCAACAGACA TGGCAGCGGT GGCGGTAGGC ACGTCTATCT GGCTACCCGC TATTTTATTC
GGACACGGCT TGTTACTCGC ACTAACGCCG ACTGTCGCCC AGCTTAATGG TTCAGGGCGC
CGTAGCCAGA TTGCCCACCA AGTCAGGCAA GGGTTTTGGC TGGCACTCTG TGTTTCCGTG
TTAATTATGC TGGTGCTCTA TAATAGTGAC CACGTTATTA AACAAATGGA TAATATTGAC
CCCGTGCTGG CGCAGAAAGC CGTGGGTTTT CTGCATGCTA TCATGTGGGG TGTGCCCGGT
TATCTGTTCT TCCAAGTTCT GAGAAATCAG TGTGAAGGGC TATCCAAGAC TAAACCGGGA
ATGGTTATCG GGTTTGTTGG CCTGCTGGTT AACATCCCGA TTAACTACAT TTTTATCTAT
GGGAAATTTG GCGCGCCGGC CTTAGGTGGC GTAGGCTGCG GGGTGGCAAC AGCCTCTGTT
TATTGGGTGA TGTTCCTGAT GATGAGATGG TACGTAACGC GCGCCCGTTC TCAACAGGAT
ATCAAACTGG AAAAAGGATT TGCCGCGCCC GATTGGCAGG TAATGAAGCG TTTAAGTGGC
CTTGGCTTGC CCGTCGCCTT GGCCCTTTTT TTCGAGGTCA CGCTGTTCGC CGTCGTCGCC
CTATTGGTAT CGCCACTGGG TATTGTTGCT GTTGCCGGAC ACCAGATTGC CCTCAACTTC
AGTTCATTGA TGTTTATGTT ACCCATGTCA CTGAGTGTAG CAGCGACAAT TCGTGTCGGG
TTTCGTCTCG GACAAGGGTC GGTGGAACAG GCTCAGGTTG CAGCCTATAC CAGCATGGCG
GTTGGTTTAT TGCTGGCCAG CGTTACCGCT GTGTTTACCA TTGTTTTCCG TGAACATATT
GCGTTGTTGT ATAACAAGAC ACCTGAAGTG GTTACCATGG CGTCCCATCT GATGTTGCTG
GCGGCACTTT ATCAGTTGTC TGATGCCGTT CAGGTTATTG GGAGTGGTGT CTTGCGGGGC
TATAAAGATA CGCGCTCCAT TTTCTTTATT ACGTTTACCG CGTATTGGCT TCTCGGGTTA
CCCAGCGGCT ACCTTCTGGG CTTGACCGAT TATATCCTCC CTGCGATGGG GCCTGCTGGT
TTCTGGATAG GTTTCATTAT CGGTCTGACG GCTGCGGCTA TTCTGATGGT GCTGCGTATC
CGTTGGCTAC AAAAACAACC TACTGCGTTT ATTCTGCAAC GGGCAGCCCA TTAG
 
Protein sequence
MQKYIVEARS LLALAIPVVI AQLSQTAMGV VDTIMAGSVS ATDMAAVAVG TSIWLPAILF 
GHGLLLALTP TVAQLNGSGR RSQIAHQVRQ GFWLALCVSV LIMLVLYNSD HVIKQMDNID
PVLAQKAVGF LHAIMWGVPG YLFFQVLRNQ CEGLSKTKPG MVIGFVGLLV NIPINYIFIY
GKFGAPALGG VGCGVATASV YWVMFLMMRW YVTRARSQQD IKLEKGFAAP DWQVMKRLSG
LGLPVALALF FEVTLFAVVA LLVSPLGIVA VAGHQIALNF SSLMFMLPMS LSVAATIRVG
FRLGQGSVEQ AQVAAYTSMA VGLLLASVTA VFTIVFREHI ALLYNKTPEV VTMASHLMLL
AALYQLSDAV QVIGSGVLRG YKDTRSIFFI TFTAYWLLGL PSGYLLGLTD YILPAMGPAG
FWIGFIIGLT AAAILMVLRI RWLQKQPTAF ILQRAAH