| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1745 |
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| Symbol | sufS |
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| ID | 5386057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2019270 |
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| End bp | 2020490 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864725 |
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| Product | bifunctional cysteine desulfurase/selenocysteine lyase |
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| Protein accession | YP_001400720 |
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| Protein GI | 153947303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000031207 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTC CTATTGAGCG TGTAAGAGCT GATTTTCCAC TGTTGAGCCG CCAGGTTAAT
GGGCAGCCGT TGGTTTATCT GGACAGCGCC GCCAGTGCGC AAAAACCTCA GGCGGTCATT
GACAAGGAGC TTCATTTTTA CCGTGATGGT TATGCGGCCG TTCATCGGGG CATTCACAGT
TTAAGTGCTG AAGCGACTCA GCAAATGGAA GCAGTACGCA CTCAGGTGGC TGATTTTATT
CACGCCGCAT CCGCAGAAGA AATTATCTTT GTCCGAGGCA CCACTGAAGC AATCAATTTG
GTTGCTAACA GTTATGGCCG CCATTTCCTT GTCACGGGTG ATAGCATTAT CATTACCGAA
ATGGAACATC ATGCCAATAT TGTGCCTTGG CAGATGTTGG CGCAAGATCT CGGTGTTGAA
ATCCGTGTTT GGCCACTGAC GGCTACCGGT GAGTTAGAGA TAACCGACTT GGCAGCGTTG
ATTGATGACA CCACGCGCTT ACTGGCGGTG ACTCAGATCT CCAACGTGTT GGGAACGGTA
AACCCGATTA AGGATATTGT GGCTCAGGCA AAAGCTGCTG GTTTGGTGGT GCTGGTGGAT
GGTGCGCAAG CGGTTATGCA TCAGCCAGTT GATGTTCAGG CGTTGGGCTG CGATTTTTAT
GTTTTCTCAG GGCACAAACT GTACGGCCCA TCGGGTATTG GGATTCTGTA CGGCAAAAGT
GCGTTGTTAC AACAGATGCC GCCATGGGAA GGGGGCGGGG CGATGATCAA AACAGTCAGT
TTGACGCAAG GCACTACGTT TGCTGATGCC CCTTGGCGCT TTGAGGCTGG GTCACCTAAT
ACTGCGGGGA TCATGGGGCT TGGCGCGGCC ATTGACTATG TCACTGAATT AGGGCTCTTG
CAGATCCAAC AGTATGAACA ATCGCTGATG CATTACGCAT TGGCGCAACT GAGCCAGATT
AAGAGCCTGA CACTGTATGG CCCAACAGAG CGTGCCGGGG TTATTGCCTT CAATCTGGGC
CTGCACCATG CCTATGATGT GGGCAGCTTT CTTGACCAAT ACGGTATTGC TATTCGTACG
GGTCATCACT GTGCGATGCC GCTGATGGCA TTCTATCAGG TACCGAGTAT GTGCCGTGCC
TCACTGGCGC TGTATAATAC CCGCGAGGAT GTTGATCGGT TGGTGGCAGG ATTACAGCGT
ATCGAAAAAT TGCTGGGGTG A
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| Protein sequence | MSFPIERVRA DFPLLSRQVN GQPLVYLDSA ASAQKPQAVI DKELHFYRDG YAAVHRGIHS
LSAEATQQME AVRTQVADFI HAASAEEIIF VRGTTEAINL VANSYGRHFL VTGDSIIITE
MEHHANIVPW QMLAQDLGVE IRVWPLTATG ELEITDLAAL IDDTTRLLAV TQISNVLGTV
NPIKDIVAQA KAAGLVVLVD GAQAVMHQPV DVQALGCDFY VFSGHKLYGP SGIGILYGKS
ALLQQMPPWE GGGAMIKTVS LTQGTTFADA PWRFEAGSPN TAGIMGLGAA IDYVTELGLL
QIQQYEQSLM HYALAQLSQI KSLTLYGPTE RAGVIAFNLG LHHAYDVGSF LDQYGIAIRT
GHHCAMPLMA FYQVPSMCRA SLALYNTRED VDRLVAGLQR IEKLLG
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