| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1727 |
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| Symbol | arnA |
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| ID | 5385461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1994939 |
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| End bp | 1996942 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640864706 |
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| Product | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase |
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| Protein accession | YP_001400702 |
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| Protein GI | 153948868 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase
[COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA TTGTATTTGC CTATCATGAT ATTGGTTGCG TGGGTCTAAA CGCATTAGCA
GAGGCGGGTT ACGATATTCA GGCGGTATTT ACCCATACTG ATAATCCTGG CGAGAATCGC
TTTTTCTCTT CGGTCGCTAG AGTGGCAGCC GATCTGGCAC TGCCAGTATT TGCACCGGAA
GATGTCAACC ACCCTTTGTG GGTTGAGCGT ATTCGTGAGT TACAGCCGGA TATCATTTTC
TCCTTCTATT ACCGCAACAT GCTTAGTGAT GAAATATTGT CATTGGCCCC ACAAGGCGGA
TTTAACTTAC ACGGTTCGTT ATTGCCCCAG TATCGTGGTC GAGCCCCAAT TAACTGGGTA
TTGGTCAATG GGGAAACAGA GACGGGTGTG ACGCTTCATC AGATGGTAAA AAAAGCGGAT
GCAGGTCCGA TTGCCGGTCA GTATAAAGTT GCCATCAGTG ATGTTGATAC GGCATTGACG
TTGCATGCCA AAATGCGTGA TGCCGCTCAA GAATTGTTGC GTAACTTATT ACCTAGAATG
AAAGAGGGCC CACTGCCGCT GACTCCGCAA AAAGAGGCAG ATGCCAGTTA TTTTGGTCGG
CGCACGGCGG CTGATGGTGA AATTCATTGG CAGAAATCTG CATTTACCAT CAACAATTTA
GTTCGTGCAG TGACTGAGCC TTACCCTGGC GCATTCAGTT ATCTGGGGCA GCGCAAACTT
ACGATTTGGC GCTCACGTCC ATTAGATTTA GTACATAACA AATTGCCAGG CACCGTGTTA
TCGACGGCCC CACTCACTGT GGCATGTGGC GAGGGGGCGC TGGAGATTAT TACGGGGCAA
GGTGAGGCCG GTCTGTATGT CCAAGGGGAT CGTTTAGCAC AAGAGATGGG CATTGTAACG
GATGTGCGTT TGGGTAATAA GCCAAGCAAT ACGTTGAAAA GACGTACCCG TGTGTTAATT
CTGGGGGTAA ATGGTTTTAT TGGTAATCAT TTGACTGAAC GCTTATTACA AGATGATCGC
TACGAAGTAT ATGGTTTGGA TATTGGCTCT GACGCGATAA GTCGCTTCTT AGGTAACCCT
GCTTTCCACT TTGTGGAAGG GGATATCAGT ATTCATTCGG AATGGATTGA ATACCATATT
AAAAAATGCG ACGTCATCTT GCCATTAGTG GCTATTGCGA CACCCATTGA ATACACCCGT
AATCCGCTGC GTGTCTTTGA GCTAGATTTT GAAGAAAACC TGAAAATTGT GCGAGATTGC
GTTAAGTACA ATAAGCGTAT TGTCTTCCCA TCGACCTCTG AAGTGTATGG TATGTGCGAT
GACAAAGAGT TTGATGAGGA TACTTCACGG CTGATTGTTG GCCCAATTAA TAAGCAACGC
TGGATTTACT CTGTATCAAA ACAGTTATTA GACCGGGTTA TCTGGGCTTA CGGCGTGAAA
GAAGGTTTGA AGTTTACGCT GTTCCGTCCA TTTAACTGGA TGGGGCCACG TTTAGATAAC
CTTGATGCTG CGCGTATCGG TAGTTCACGT GCGATTACAC AGCTTATTCT GAATTTGGTC
GAAGGCTCAC CAATCAAGCT GGTCGATGGT GGTGCCCAAA AACGTTGTTT TACTGATATC
CACGATGGCA TTGAAGCGTT ATTCCGTATT ATTGAAAACC GGGATGGTTG CTGTGATGGT
CAGATCATTA ATATTGGTAA TCCAACTAAC GAAGCCAGTA TTCGTGAATT AGCCGAAATG
CTGTTAACGA GCTTCGAAAA TCATGAATTA CGTGATCACT TTCCGCCATT TGCAGGTTTT
AAAGATATTG AGAGCAGTGC ATATTATGGG AAAGGTTATC AGGATGTTGA GTACCGCACG
CCAAGTATTA AGAATGCGCG CCGAATATTG CACTGGCAGC CAGAAATTGC TATGCAACAA
ACGGTCACTG AGACGCTGGA CTTTTTCTTG CGCGCTGCCG TAATTGAGAA AACTGCAGCC
CCTAAAGATG AGTTGAACGC ATGA
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| Protein sequence | MKAIVFAYHD IGCVGLNALA EAGYDIQAVF THTDNPGENR FFSSVARVAA DLALPVFAPE
DVNHPLWVER IRELQPDIIF SFYYRNMLSD EILSLAPQGG FNLHGSLLPQ YRGRAPINWV
LVNGETETGV TLHQMVKKAD AGPIAGQYKV AISDVDTALT LHAKMRDAAQ ELLRNLLPRM
KEGPLPLTPQ KEADASYFGR RTAADGEIHW QKSAFTINNL VRAVTEPYPG AFSYLGQRKL
TIWRSRPLDL VHNKLPGTVL STAPLTVACG EGALEIITGQ GEAGLYVQGD RLAQEMGIVT
DVRLGNKPSN TLKRRTRVLI LGVNGFIGNH LTERLLQDDR YEVYGLDIGS DAISRFLGNP
AFHFVEGDIS IHSEWIEYHI KKCDVILPLV AIATPIEYTR NPLRVFELDF EENLKIVRDC
VKYNKRIVFP STSEVYGMCD DKEFDEDTSR LIVGPINKQR WIYSVSKQLL DRVIWAYGVK
EGLKFTLFRP FNWMGPRLDN LDAARIGSSR AITQLILNLV EGSPIKLVDG GAQKRCFTDI
HDGIEALFRI IENRDGCCDG QIINIGNPTN EASIRELAEM LLTSFENHEL RDHFPPFAGF
KDIESSAYYG KGYQDVEYRT PSIKNARRIL HWQPEIAMQQ TVTETLDFFL RAAVIEKTAA
PKDELNA
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