Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1723 |
Symbol | arnB |
ID | 5388237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1992107 |
End bp | 1993261 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864704 |
Product | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase |
Protein accession | YP_001400700 |
Protein GI | 153948959 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.434923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGTT TTTTGCCTTT TTCTAGGCCA GCAATAGGTA GTGAAGAAAT TAATGCTGTT GCTAATGTAT TAGGCTCTGG TTGGATTACT ACCGGTCCCC AGAATCATCA ATTGGAAACT GATTTCTGTC AAATTTTTGG TTGCAAACAT GCGATCGCTG TATGTTCTGC AACAGCAGGA ATGCACATTA CATTGCTGGC GTTGGGCATT GGCCCTGGTG ATGAGGTTAT TACGCCATCA CAGACGTGGG TTTCTACGAT TAACATGATC GTGTTGCTGG GTGCAGAACC CGTAATGGTC GATGTTGATC GCGATACCTT GATGGTAAAT GCGGCTGCTA TTGAAGCGGC GATTACACCG AACACCAAAG CCATTATTCC CGTCCACTAT GCTGGCGCGC CCTGCGACCT TGATGCATTG CGTCAGATCT CCCAACGGCA TGGTATCCCA CTGATTGAAG ATGCTGCACA TGCCGTTGGC ACTCGTTATC GAGATCAATG GATTGGTGAG CAGGGGACCG CTATTTTCTC TTTCCATGCC ATCAAGAATA TCACTTGTGC TGAGGGGGGA TTAGTTGCCA CCGATGATGA TGAATTGGCG GCCAGAGTCC GTCGGCTTAA GTTCCATGGC CTGGGTGTGG ATGCCTTTGA CCGACAAATA CAGGGGCGTA GCCCACAGGC TGAAGTTGTG GAACCGGGGT ATAAATATAA CTTATCTGAT ATCCACGCCG CTATTGCGGT GGTGCAGCTT AGACGTTTGC CCGAAATTAA CGCCCGTCGG CAGGCGCTGG TTGCTTCCTA TCATAAGGCA TTAGCGCATT TGCCTTTGCA GCCGTTGGCC TTGCCTCACT ATTCTCATCA ACATGCCTGG CACCTTTTCA TGGTGCGTGT TGATGAAGAA CGCTGTGGTA TTAGCCGGGA TCAACTGATG GCGTGTTTGA AAGATATGGG TATTGGCAGT GGGCTACATT TTCGTGCGGT ACATAGCCAA AAATATTATC GCGAACGTTA TCCGCATTTG TGTTTGCCCA ACACGGAATG GAACTCAGCC AGATTGTGCA CGTTACCGCT TTTCCCCGAT ATGCTAGACA GTGATATTGA ACGAGTGGCT AATGCATTAA CAACAATTAT AGGGTCACAC CGTGTCACTA AATGA
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Protein sequence | MQSFLPFSRP AIGSEEINAV ANVLGSGWIT TGPQNHQLET DFCQIFGCKH AIAVCSATAG MHITLLALGI GPGDEVITPS QTWVSTINMI VLLGAEPVMV DVDRDTLMVN AAAIEAAITP NTKAIIPVHY AGAPCDLDAL RQISQRHGIP LIEDAAHAVG TRYRDQWIGE QGTAIFSFHA IKNITCAEGG LVATDDDELA ARVRRLKFHG LGVDAFDRQI QGRSPQAEVV EPGYKYNLSD IHAAIAVVQL RRLPEINARR QALVASYHKA LAHLPLQPLA LPHYSHQHAW HLFMVRVDEE RCGISRDQLM ACLKDMGIGS GLHFRAVHSQ KYYRERYPHL CLPNTEWNSA RLCTLPLFPD MLDSDIERVA NALTTIIGSH RVTK
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