Gene YpsIP31758_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1720 
SymbolbtuC 
ID5384829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1989343 
End bp1990350 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content49% 
IMG OID640864701 
Productvtamin B12-transporter permease 
Protein accessionYP_001400697 
Protein GI153948990 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4139] ABC-type cobalamin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.111664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAA GTCAGTTATT TACCGCACTT CAACAACGGC AGCGGCAGCG CGACTATCGT 
TATCTTACTG GGCTGGTTGT CATGCTTTTG TTCGCGCTAC TCATCAGTTT ATGTGCGGGT
GATGTCTGGA TTTGGCCAGA GCACTGGTTC AGTGAAAGTG GCAAATTATT TGTTTGGCAA
CTACGTTTGC CCCGATCTAT GGCTGTAATT ATGGTTGGTG CCAGTCTGGC CGTGTCGGGT
GCTGTGATGC AGGCACTGTT TGAAAATCCG TTAGCTGAAC CGGGTCTACT TGGCGTGGCA
AATGGCGCAG GTGTTGCATT GGTGACGGCC GTATTATTAG GTCATGGATT ATTGCCAATT
TGGGTTCTGA GCACGTGTGC TATTATTGGC GCATTGTTGA TGACATCTAT TCTGTTAAGT
TTCACCCGTC GCCGTTTATT AACTAATGCC CAGCTATTAT TGGTCGGTGT AGCCTTAGGT
ATTATTTGCA GTGCAATGAT GACTTGGGCC GTCTATTTCA GCACCAGTTT GGATTTACGT
CAGCTCATGT ATTGGATGAT GGGGGGGTTC AGCGGTGTTG ACTGGCGTCA GCAAAGTTTG
GTGCTGGCTC TCTTGCCTAC CGTCATATGG CTTTGCTGCC AAGGCCGTGT CCTGAACTTC
ATGTCACTCG GTGAGCAGCA GGCCAGGCAA TTGGGGGTGT CGCTTCATTT ATGGCGGAAT
TTATTAGTAC TGGCGATCGG ATTACTGGTC GGCATTAGTG TTGCACTCGC GGGTGTCATC
AGTTTTATTG GCTTGGTTAT TCCTCATATT TTACGGTTAA CCGGTTTAAC TGATCAGCGC
CGGCTATTAG CGGGCTGTGC ATTCGCCGGC GGGGGGGTAT TATTATTAGC TGATGTTGTC
GCTCGCACGG TATTATCTTC GGCAGAGCTA CCGATTGGTG TGGTTACCGC AACATTAGGA
TCGCCATTAT TTATCTGGTT ACTGATACGG GTGAAAGGAG TAAAGTGA
 
Protein sequence
MQTSQLFTAL QQRQRQRDYR YLTGLVVMLL FALLISLCAG DVWIWPEHWF SESGKLFVWQ 
LRLPRSMAVI MVGASLAVSG AVMQALFENP LAEPGLLGVA NGAGVALVTA VLLGHGLLPI
WVLSTCAIIG ALLMTSILLS FTRRRLLTNA QLLLVGVALG IICSAMMTWA VYFSTSLDLR
QLMYWMMGGF SGVDWRQQSL VLALLPTVIW LCCQGRVLNF MSLGEQQARQ LGVSLHLWRN
LLVLAIGLLV GISVALAGVI SFIGLVIPHI LRLTGLTDQR RLLAGCAFAG GGVLLLADVV
ARTVLSSAEL PIGVVTATLG SPLFIWLLIR VKGVK