Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1718 |
Symbol | ihfA |
ID | 5387561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1988028 |
End bp | 1988324 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864699 |
Product | integration host factor subunit alpha |
Protein accession | YP_001400695 |
Protein GI | 153948307 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.000312537 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTTA CTAAAGCTGA AATGTCAGAA CATCTGTTTG AAAAGCTAGG GCTTAGCAAA CGAGATGCTA AAGATCTGGT TGAGTTATTC TTCGAAGAAG TACGTCGTGC TCTGGAGAAT GGCGAACAGG TCAAACTGTC TGGCTTTGGC AATTTTGATC TGCGAGACAA GAACCAACGT CCAGGGCGTA ACCCTAAAAC GGGTGAGGAT ATTCCTATAA CGGCGCGCCG TGTGGTGACT TTCCGTCCTG GGCAGAAACT GAAAAGCCGG GTAGAGAGTG CCACTCCAAA AGAGTGA
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Protein sequence | MALTKAEMSE HLFEKLGLSK RDAKDLVELF FEEVRRALEN GEQVKLSGFG NFDLRDKNQR PGRNPKTGED IPITARRVVT FRPGQKLKSR VESATPKE
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