| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1694 |
|---|
| Symbol | kduI |
|---|
| ID | 5388158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1969004 |
|---|
| End bp | 1969840 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640864675 |
|---|
| Product | 5-keto-4-deoxyuronate isomerase |
|---|
| Protein accession | YP_001400671 |
|---|
| Protein GI | 153947495 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3717] 5-keto 4-deoxyuronate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.730903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTC GTCAAAGTAT TCATAGCGAC CACGCTAAGC AACTCGACAC AGCTGGCCTG
CGCCGTGAAT TTCTGATTGA AAAGATTTTC GCCGCAGATG ACTACACCAT GACCTATAGC
CACATTGACC GCATTATCGT CGGTGGCATT TTACCGGTCA GCAAAGCCGT CAGCATCGGT
AATGAAGTGG GTAAGCAACT GGGTGTCAGT TACTTCCTCG AACGCCGTGA ATTAGGTGCA
ATCAATATTG GTGGGCCAGG TCTGATAGTG GTTGATGGGC AGACTTATGA AATTGGCAAT
GAAGAAGCCT TGTATGTCGG TAAAGGTGCG AAAGAAGTAA AATTTAGCAG CATCGACAGG
GCTAATCCTG CCAAGTTCTA CTACAACAGT GCCCCTGCTC ACACCACTTA TCCAAACAAA
AAAATCACCC TGGCAGAGGC GTCACCACAA ACGTTAGGTG ATGATGCCAC CAGTAACCGT
CGCACTATCA ACAAATATAT TGTGCCTGAC GTGTTACCCA CCTGCCAATT GAGCATGGGT
CTGACCAAAC TGGCTCCAGG TAGTCTGTGG AATACCATGC CATGTCATAC CCATGAACGC
CGTATGGAAG TGTATTTTTA CTTTGATATG GACGAAGAGA CTGCCGTCTT CCATATGATG
GGACAGCCTC AGGAAACGCG TCATTTGCTC GTTCATAACG AACAAGCGGT AATTTCACCA
AGTTGGTCTA TCCATTCTGG CGTAGGCACC AAACGTTATA CCTTCATCTG GGGCATGGTC
GGTGAAAACC AAGTCTTTGG TGATATGGAC CATATAGCTG TTAGCGAACT GCGTTAA
|
|---|
| Protein sequence | MQVRQSIHSD HAKQLDTAGL RREFLIEKIF AADDYTMTYS HIDRIIVGGI LPVSKAVSIG
NEVGKQLGVS YFLERRELGA INIGGPGLIV VDGQTYEIGN EEALYVGKGA KEVKFSSIDR
ANPAKFYYNS APAHTTYPNK KITLAEASPQ TLGDDATSNR RTINKYIVPD VLPTCQLSMG
LTKLAPGSLW NTMPCHTHER RMEVYFYFDM DEETAVFHMM GQPQETRHLL VHNEQAVISP
SWSIHSGVGT KRYTFIWGMV GENQVFGDMD HIAVSELR
|
|---|
| |