| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1693 |
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| Symbol | kduD1 |
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| ID | 5385353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1968151 |
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| End bp | 1968912 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640864674 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001400670 |
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| Protein GI | 153950191 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.523034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAG ATTCCTTTGA ATTGAAAGGT AAAGTTGCGC TGGTGACTGG TTGCGATACT
GGCTTAGGCC AAGGCATGGC GATCGGTTTA GCAGAAGCGG GTTGCGATAT CATCGGCGTG
AATATTGTCG AGCCACGTGA GACTATCGAA CAAGTGACTG CACTGGGCCG TCGCTTTTTC
AGCCTGACCG CTGACCTGAG CAACATTGAA TGCATCCCTT CCCTATTAGA GCGTGCTGTC
GCTGAATTTG GCCATATTGA TATTCTGGTC AACAACGCGG GGATCATCCG CCGTGAAGAT
GCCATTAATT TCAGCGAAAA GGACTGGGAC GATGTCATGA ACGTTAACAT CAAGTCTGTG
TTCTTTATGT CCCAAGCGGT TGCTAAACAG TTTATTAAAC AAGGTAATGG CGGCAAAATT
ATTAACGTTG CCTCGATGCT GTCTTACCAA GGGGGGATTC GTGTCCCTTC TTATACTGCC
TCGAAAAGTG CCGTCATGGG CGTGACCCGT CTGTTAGCCA ACGAATGGGC AAAGCACGGC
ATCAATGTCA ACGCGGTCGC TCCAGGTTAT ATGGCAACCA ATAACACCCA GCAGTTGCGT
AAAGATGAAG AGCGTAGCAA AGAGATCCTT GACCGTATCC CGGCTGGCCG TTGGGGCTTA
CCTGATGATC TGAAAGGCCC AGTAGTCTTC CTGGCCTCTA AAGCATCTGA TTATATCAGC
GGTTATACTA TCGCCGTTGA TGGCGGTTGG TTAGCACGAT AA
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| Protein sequence | MILDSFELKG KVALVTGCDT GLGQGMAIGL AEAGCDIIGV NIVEPRETIE QVTALGRRFF
SLTADLSNIE CIPSLLERAV AEFGHIDILV NNAGIIRRED AINFSEKDWD DVMNVNIKSV
FFMSQAVAKQ FIKQGNGGKI INVASMLSYQ GGIRVPSYTA SKSAVMGVTR LLANEWAKHG
INVNAVAPGY MATNNTQQLR KDEERSKEIL DRIPAGRWGL PDDLKGPVVF LASKASDYIS
GYTIAVDGGW LAR
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