Gene YpsIP31758_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1689 
SymboltogA 
ID5387772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1963154 
End bp1964281 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content46% 
IMG OID640864670 
Productoligogalacturonide ABC transporter, ATP-binding protein 
Protein accessionYP_001400666 
Protein GI153948012 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0417023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAG TCATTTTCAA TAAATTAGGT AAAGTTTACT CCAACGGTTT CCGCGCGGTA 
CATGGCATTG ACCTGAAGAT TAATGATGGC GAATTTATGG TTATCGTTGG TCCATCTGGC
TGTGCTAAAT CCACGACCCT GCGTATGTTG GCCGGTCTTG AAACGATCAG TGATGGTGAG
GTCCGTATTG GTGACCGGGT GGTCAATAAT TTAGCGCCAA AATCACGTGG CATTGCCATG
GTGTTCCAGA ACTATGCGTT ATATCCGCAT ATGACAGTAA AAGAGAATCT GGCCTTTGGG
TTGAAGTTAA GCAAATTACC CAAAGATCAA ATTGAGGCTC AAGTTGCTGA AGCCGCCAAA
ATTCTGGAAT TAGAAGATCT TCTGGACCGC TTACCCCGCC AGTTGTCCGG TGGTCAGGCA
CAGCGTGTTG CTGTGGGCCG TGCCATTGTA AAAAAACCAG ATGTGTTCTT GTTCGATGAG
CCACTATCAA ACTTGGATGC CAAACTGCGC GCCTCCATGC GTATTCGCAT CTCTGATTTG
CATAAACAAT TGAAAAAAAG CGGTAAAGCA GCAACCACCG TTTACGTAAC CCATGACCAG
ACAGAAGCCA TGACTATGGG CGACCGTATC TGTGTGATGA AGCTGGGCCA CATTATGCAA
GTGGACACCC CCGACAATCT CTATCACTAC CCTACCAATA TGTTTGTTGC CGGTTTTATC
GGCGCGCCGG AAATGAATAT CAAACCGAGC ACGCTGGTAG AAAAAGAGGG GCAAATTGGC
CTGACAGTTG GTCAATACAC CCTGGTATTG AATGAAAGAC AGCAGGCCAA AGTTGCCACC
CACACAGGAG AAAAAGTGTT CTTTGGCGTA CGTCCTGAAT TTATTAGCAT GTCTCTGCAA
CCGTTTGTCG GTAATCACTC ACAAGGTGAA CTGGTTCGGG TAGAAAACAT GGGCCATGAA
TTCTTTATGT ATATCAAGGT TGAAAACTTT GAATTGACCT GCCGTCTGCC GTCTGACGAA
GCACGACCGA TTATTGAAAA CGGCCTGCAT CGCACCGTGT ACTTCCAGTT TGATATGGAT
AAATGCCATA TCTTTGATGC AAAAACAGAA AAAAATATCT CTCTTTAA
 
Protein sequence
MAEVIFNKLG KVYSNGFRAV HGIDLKINDG EFMVIVGPSG CAKSTTLRML AGLETISDGE 
VRIGDRVVNN LAPKSRGIAM VFQNYALYPH MTVKENLAFG LKLSKLPKDQ IEAQVAEAAK
ILELEDLLDR LPRQLSGGQA QRVAVGRAIV KKPDVFLFDE PLSNLDAKLR ASMRIRISDL
HKQLKKSGKA ATTVYVTHDQ TEAMTMGDRI CVMKLGHIMQ VDTPDNLYHY PTNMFVAGFI
GAPEMNIKPS TLVEKEGQIG LTVGQYTLVL NERQQAKVAT HTGEKVFFGV RPEFISMSLQ
PFVGNHSQGE LVRVENMGHE FFMYIKVENF ELTCRLPSDE ARPIIENGLH RTVYFQFDMD
KCHIFDAKTE KNISL