| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1687 |
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| Symbol | kdgM2 |
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| ID | 5386671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1960838 |
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| End bp | 1961548 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640864668 |
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| Product | oligogalacturonate-specific porin protein KdgM |
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| Protein accession | YP_001400664 |
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| Protein GI | 153947668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.219149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAA AATTAATTAC TCTGGCAGTG GCAGCAGCAG CAGTATCCGT TATCAGTTTT
AGTTCCGTTG CAACAACGAT TGACTATCGA CATGAAATGA AAGACACCAG TAAATCCGAT
CACAAAGACC GTTTACTGAT CTCAAACCGT TTTGCGAATG GTTTTGGTTT GTCCTTGGAA
GGTAAGTGGG GCCAGCACAG CTCTGATACC ACGCCAAATA AGCCATTCAA TGAGCAGGTC
AGTAATGGGA CCGAAATGGT GGCCAGTTAT GTTTATAAAT TCAATAACAC CTTCCAGATC
GAACCTGGTT TCTCATTAGA CTCTACTTCA GATTCCAACA ACTACCGTCC ATATATCCGT
GGAAAAGTGG CTTTCACTGA TGATTTCTCA ACGTCACTGC GCTACCGTCC ATACTACAAA
CGTAATCAAC CTGCTCAGAC TAAATCGACT GAGAAAGGAC ATGAGTTCAC CATGTTATTT
GCTTATAACT TCTTGAAAGA CTATTCAGCT GAATACGAAT TAAACTACAA GAAGTCTGAA
GACGAAATTC TGGCTAATAA AGAAAAATAC GAATGGGCAC ATGATGTAAA AATCGCCTAC
AAATGGGATA AAAACTGGAA ACCCTATATG GCTATTGGTA ATGTCCCAGG CAGTAAAGTA
ACTGACGAAC GCCAAACTCG TTACCGCGTA GGTATCCAAT ACAGTTTCTA A
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| Protein sequence | MKLKLITLAV AAAAVSVISF SSVATTIDYR HEMKDTSKSD HKDRLLISNR FANGFGLSLE
GKWGQHSSDT TPNKPFNEQV SNGTEMVASY VYKFNNTFQI EPGFSLDSTS DSNNYRPYIR
GKVAFTDDFS TSLRYRPYYK RNQPAQTKST EKGHEFTMLF AYNFLKDYSA EYELNYKKSE
DEILANKEKY EWAHDVKIAY KWDKNWKPYM AIGNVPGSKV TDERQTRYRV GIQYSF
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