| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1685 |
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| Symbol | |
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| ID | 5387587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1958197 |
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| End bp | 1959588 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640864666 |
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| Product | sodium:dicarboxylate symporter family protein |
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| Protein accession | YP_001400662 |
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| Protein GI | 153949102 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.24446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAC CACTTGTGGT TAATGTGCTG GTATTTGCAG CACTGCTATT GCTCTTAGCA
CAAACTCGGC ATAAACAGTG GAGTTTGGCT AAAAAAGTAT TGATCGGCTT AGTACTGGGT
GTGCTGTTTG GTTCAGGGCT GCAATGGGTC TATGGCGCAG ATAATCCAAT ACTGAAAGAG
TCTATTACTT GGTTTAATAT TATTGGCAAC GGCTATGTGC AACTCTTGCA AATGATTGTT
ATGCCGCTGG TATTCGCCTC AATTTTGAGC GCGGTAGCTA AACTGCACAA TGCGTCATCT
CTGGGTAAAA TCAGTATTTT GACCATTGGT ACTTTGCTCT TTACGACATT AATTGCCGCC
TTGGTTGGTG TATTCGTGAC CAACTTATTT GGTCTGACGG CCGAGGGGTT GATACAAGGT
ACTCAGGAAA CAGCCCGTCT AAGCGCAATT GAGAGTAATT ATCTAGGCAA AGTAGCCGAC
CTGACTGTGC CACAGCTGAT CTTGTCATTT ATTCCCAAAA ATCCGTTTGC CGATTTAACG
GGTGCCAGCC CAACGTCAAT CATCAGTATT GTAATATTCG CAACCTTCCT CGGTATCGCG
GCGCTACAAC TGTTAAAAGA TGATGTCACG AAGGGCCAAC GTGTACTGGC AGCGATTGAT
ACGCTGCAAG CTTGGGTGAT GAAGTTAGTA CGATTAGTGA TGAAGTTGAC CCCATACGGT
GTATTGGCAC TGATGACCAA AGTGGTTGCC GGTTCTAATA TTCAGGACAT TATGAAATTG
GGCAGCTTTG TTGTGGCATC GTATCTGGGC CTGGCCATCA TGTTTGTTGT CCATGCGGTG
TTGCTGTCGC TCACGGGTAT CAATCCGCTG AAATTCTTTA AAAAAGTGTG GCCGGTACTG
ACTTTTGCGT TTACCAGCCG CTCCAGTGCC GCCAGTATTC CATTAAATGT TGAAGCGCAA
ACCCGCCGTC TGGGTGTCCC AGAATCTATC GCTAGCTTCT CAGCGTCTTT TGGAGCAACT
ATTGGGCAAA ATGGCTGTGC GGGCCTGTAT CCAGCGATGT TGGCGGTCAT GGTGGCACCA
ACGGTTGGTA TTAACCCGTT GGATCCGGTA TGGATTGCTA CTCTGGTCGG GATTGTTACT
ATCAGTTCTG CGGGTGTTGC CGGTGTGGGT GGCGGTGCAA CCTTCGCCGC CCTAATTGTA
CTGCCCGCAT TGGGCTTGCC GGTGACATTG GTTGCGTTAC TTATCTCCGT TGAGCCATTG
ATTGATATGG GCCGTACGGC ATTGAACGTC AATGGCTCAA TGACTGCCGG GACGATCACC
AGCCAATTAA TGAAGCAAAC AGATAAAAAC ATTTTGAATA ATGAAGATGA CGACGTTCTG
ACTCACCAGT AA
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| Protein sequence | MNLPLVVNVL VFAALLLLLA QTRHKQWSLA KKVLIGLVLG VLFGSGLQWV YGADNPILKE
SITWFNIIGN GYVQLLQMIV MPLVFASILS AVAKLHNASS LGKISILTIG TLLFTTLIAA
LVGVFVTNLF GLTAEGLIQG TQETARLSAI ESNYLGKVAD LTVPQLILSF IPKNPFADLT
GASPTSIISI VIFATFLGIA ALQLLKDDVT KGQRVLAAID TLQAWVMKLV RLVMKLTPYG
VLALMTKVVA GSNIQDIMKL GSFVVASYLG LAIMFVVHAV LLSLTGINPL KFFKKVWPVL
TFAFTSRSSA ASIPLNVEAQ TRRLGVPESI ASFSASFGAT IGQNGCAGLY PAMLAVMVAP
TVGINPLDPV WIATLVGIVT ISSAGVAGVG GGATFAALIV LPALGLPVTL VALLISVEPL
IDMGRTALNV NGSMTAGTIT SQLMKQTDKN ILNNEDDDVL THQ
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