| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1680 |
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| Symbol | |
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| ID | 5386196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1952867 |
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| End bp | 1954234 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864661 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001400657 |
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| Protein GI | 153950000 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAT CAACAAGTGA TGGCTTACCT GTACCTCAAC GCTATGCCGC GATACTGGTT
ATTGCTTTAG GTATTATGAT GGCGGTATTG GACGGCACTA TTGCAAACGT GGCATTACCG
ACTATCGCAC GTGACCTCAA TACCAGCCCA GCAACATCTA TCTGGGTTGT CAATGCTTAT
CAGCTCGCCA TCACCATCTC ACTGCTTTCC ATGGCGTCAT TGGGCGATAT CATTGGTTAC
CGGCGGGTTT ATCAAGCTGG CTTACTGATA TTCAGCGTGA CCTCACTGTT TTGTGCTCTG
TCCGATTCGT TATGGACCCT GACGTTTGCC CGTGTGCTAC AAGGGTTTGG CGCGGCGGCA
TTGATGAGCG TCAATACCGC CCTGATTCGT ATCATTTATC CTCGAGCCCA ACTTGGTCGA
GGTATTGGTA TCAATACCTT GATTGTTGCT GTGTCTTCAG CCGCGGGGCC CAGTATTGCC
GCTGCCGTGT TGTCTGTCGC CTCTTGGCAA TGGCTGTTCG CCCTCAACGT GCCAATTGGG
CTATTAGCGT GGTGTTTAGG TATAAAATTC CTACCCGCCA ATAATACGAA AAGCAACGGC
AATCGCTTTG ATATCACCAG TTGTGTTCTG AATGCGCTGA CATTTGGCTT ATTGATCACC
GCGATCAGTG GTTTTTCCCA AGGGCAAAGC CCGGCAGTGA TTGCTGCTCA AGTGGTTGCC
CTATTACTGA TTGGTTTCTT CTTTGTGCGT CGTCAACTCA CGCAATCCTT CCCACTGCTC
CCCGTGGATT TACTGCGTAT TCCTATTTTC GCGTTGTCGA TTGGCACTTC AATTTTTTCT
TTTGCCGCTC AAATGCTGGC AATGGTGTCG CTTCCCTTCT TTTTACAGAC CGTATTGGGC
CGCGACGAAG TGGCAACCGG GCTACTGTTG ACTCCATGGC CGTTGGCCAC CATGGTCATT
GCTCCGATCG CGGGGCGTTT GGTTGAGCGC TATCATGCAG GTTTATTAGG TGGGATTGGT
CTGGCTGTTT TTGCCAGTGG TCTATTCTTG CTGGCGGTGT TACCCGCCAA CCCCAGCGAC
GTAGATATTA TCTGGCGGAT GATACTGTGT GGCGCGGGTT TTGGGCTGTT CCAGACCCCA
AATAATCATA CGATCATTTC TGCCGCTCCA CAGCATCGTA GCGGCGGAGC CAGTGGCATG
TTGGGGACCG CCCGCTTGCT AGGACAGACC TCAGGTGCTG CCTTGGTTGC GCTAATGTTC
AATATGTTCT CAACCAACGG CACCCACGCC TCCTTGATAC TGGCTGGCTG TTTTGCCAGT
ATCGCGGCAC TGGTGAGTCT CTTACGTGTA ACACAAAAAA GTCATTAG
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| Protein sequence | MNPSTSDGLP VPQRYAAILV IALGIMMAVL DGTIANVALP TIARDLNTSP ATSIWVVNAY
QLAITISLLS MASLGDIIGY RRVYQAGLLI FSVTSLFCAL SDSLWTLTFA RVLQGFGAAA
LMSVNTALIR IIYPRAQLGR GIGINTLIVA VSSAAGPSIA AAVLSVASWQ WLFALNVPIG
LLAWCLGIKF LPANNTKSNG NRFDITSCVL NALTFGLLIT AISGFSQGQS PAVIAAQVVA
LLLIGFFFVR RQLTQSFPLL PVDLLRIPIF ALSIGTSIFS FAAQMLAMVS LPFFLQTVLG
RDEVATGLLL TPWPLATMVI APIAGRLVER YHAGLLGGIG LAVFASGLFL LAVLPANPSD
VDIIWRMILC GAGFGLFQTP NNHTIISAAP QHRSGGASGM LGTARLLGQT SGAALVALMF
NMFSTNGTHA SLILAGCFAS IAALVSLLRV TQKSH
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