Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1667 |
Symbol | |
ID | 5386642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1935464 |
End bp | 1936018 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864648 |
Product | hypothetical protein |
Protein accession | YP_001400644 |
Protein GI | 153947406 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.239373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAA CCTTATTTAC TTTAAGTGTA ATAGCCATAT TACAGACAGC ACCACACATA ACCTATGCTG CTGCAACTAC CGGTACACTG TCATCAACAC TGACCATTAT CTCCGGCTGT TATATCAACG ATGGGACCGG GTCTGGAAGC CTGAGTAATT TGGGAACCAT AAACTTCGGT AGTGTAGTGG CGCTATCCTC AGTAATTAAC GTCGCATTCA GTGGCACACT GAGCGGGACT CTCAGTTTGT ATTGTAGTGC TAATACCGCG TATACCATCG CTATTGATAA TGGGCTGTAC AGCACGTCAG GACAGCGTCG GCTCCGGGGT GGGGCCGCAG CACCAACCAC CTTTGAGTAT GTTAATTATA ATCTGTTCAA AGACAGTAGT TACAATCAGC CATGGAACGC AACCCCGACG ACGGGTGTTC AAAGTGGTAC CGGCACCGGG ATTGCCACGC CTATTCCTTT GACTATCTAT GCTCAAGTCC CGATACAAAC AACGCCCAGT GTCAGTACTT ATATTGATAC TGTTATCGTT ACTGTTACTT GGTAA
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Protein sequence | MRKTLFTLSV IAILQTAPHI TYAAATTGTL SSTLTIISGC YINDGTGSGS LSNLGTINFG SVVALSSVIN VAFSGTLSGT LSLYCSANTA YTIAIDNGLY STSGQRRLRG GAAAPTTFEY VNYNLFKDSS YNQPWNATPT TGVQSGTGTG IATPIPLTIY AQVPIQTTPS VSTYIDTVIV TVTW
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