Gene YpsIP31758_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1667 
Symbol 
ID5386642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1935464 
End bp1936018 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content47% 
IMG OID640864648 
Producthypothetical protein 
Protein accessionYP_001400644 
Protein GI153947406 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.239373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAAA CCTTATTTAC TTTAAGTGTA ATAGCCATAT TACAGACAGC ACCACACATA 
ACCTATGCTG CTGCAACTAC CGGTACACTG TCATCAACAC TGACCATTAT CTCCGGCTGT
TATATCAACG ATGGGACCGG GTCTGGAAGC CTGAGTAATT TGGGAACCAT AAACTTCGGT
AGTGTAGTGG CGCTATCCTC AGTAATTAAC GTCGCATTCA GTGGCACACT GAGCGGGACT
CTCAGTTTGT ATTGTAGTGC TAATACCGCG TATACCATCG CTATTGATAA TGGGCTGTAC
AGCACGTCAG GACAGCGTCG GCTCCGGGGT GGGGCCGCAG CACCAACCAC CTTTGAGTAT
GTTAATTATA ATCTGTTCAA AGACAGTAGT TACAATCAGC CATGGAACGC AACCCCGACG
ACGGGTGTTC AAAGTGGTAC CGGCACCGGG ATTGCCACGC CTATTCCTTT GACTATCTAT
GCTCAAGTCC CGATACAAAC AACGCCCAGT GTCAGTACTT ATATTGATAC TGTTATCGTT
ACTGTTACTT GGTAA
 
Protein sequence
MRKTLFTLSV IAILQTAPHI TYAAATTGTL SSTLTIISGC YINDGTGSGS LSNLGTINFG 
SVVALSSVIN VAFSGTLSGT LSLYCSANTA YTIAIDNGLY STSGQRRLRG GAAAPTTFEY
VNYNLFKDSS YNQPWNATPT TGVQSGTGTG IATPIPLTIY AQVPIQTTPS VSTYIDTVIV
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