Gene YpsIP31758_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1666 
Symbol 
ID5384617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1934928 
End bp1935419 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content51% 
IMG OID640864647 
Producthypothetical protein 
Protein accessionYP_001400643 
Protein GI153946934 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.607535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGCGGTT TACTGCTATT CCAAGCATAT CCAGTAAATG CAGTATCAAA AACAGCCAAT 
ATAACGGTAA CGGCCACGCT ACTGCCCACC TGCCTTGCGC GTTTTCTGGT CAGTGGCAGC
ACAAGTTTTG GCACCTTGGA TTTTGGATCA ACTGTCGCGT TAACCCAACC AATCTCGGTG
GCAGGTCAAA CCAATAGTGG CGCTATCACC GTGCAATGCA GCAACGGTAC CAGTTTTAAC
GTATTACTGA GCAGCGGACA GAGTGGCAAT ACCAATAACC GTTATCTGTC CGGGGGGCCA
TCAGCCCAGC AAGTGAGCTA CAACCTGTAT ACCAACGCGA CCTATAGTGT CATCTGGGAT
GATGTGGTGG GTGTATCGCA GGTTGCTACC GGACAAGTCG TCACCATACC GGTTTATGGC
CTGGTTCCTG CACAATCGAC GCCTGCGGTA GGGACCTATA CTGATACCGT TCAGGTCACG
GTGAGTTGGT AA
 
Protein sequence
MCGLLLFQAY PVNAVSKTAN ITVTATLLPT CLARFLVSGS TSFGTLDFGS TVALTQPISV 
AGQTNSGAIT VQCSNGTSFN VLLSSGQSGN TNNRYLSGGP SAQQVSYNLY TNATYSVIWD
DVVGVSQVAT GQVVTIPVYG LVPAQSTPAV GTYTDTVQVT VSW