Gene YpsIP31758_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1665 
Symbol 
ID5384483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1934350 
End bp1934934 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content47% 
IMG OID640864646 
Producthypothetical protein 
Protein accessionYP_001400642 
Protein GI153946900 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.528385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTAAGTA TAGAGGGAGG GCTAACAATG ATAAGTCTTT TTTCTCCATG TCACCTCAGT 
GCCGCTTTAC TTATCTCAGC ACTGTCTATC GTACCTACCA ACGCGGCACC CTCACCCGTA 
TCTAGCCCTT TTACTGTCAA CGCTACCGTG CTAACTGGAT GTGTTCTGGG GGGAGGCGCA 
ACTGACAGCT CCAATTTTGG TTCCATAAAT TTTGGCAATA TTACTTCGCT GGCAACCGCC 
ATTAATGCAA CTTCTGGGCT GAATGCAGGA ACCATTACCA TTCAGTGTAA TGGTAATCCT 
AGCGTAACAC TCGCGCTCAA TTCAGGGGCC AACATGACGG GTAACATCTC CGCGGGTAGG 
CACCTGCTTA ACAGCAGTAC CGGTGAATAC TTGCTGTATC AAATTTATCA AAATAGCCCC 
CGAACCCTTA TTTGGGGAGA TGGTTCAAAT GGGGGGGCAA CACAAGTCAT TGCTACCGAC 
GGCACGCTAC AGCAAGTTAT TTTATATGCA CAACTGTTTG CCAGTAATAC ACAACCTACT 
GCGGGAGTTT ATCTAGATAC GTTATTGGTT ACTGTCACTT ACTGA
 
Protein sequence
MVSIEGGLTM ISLFSPCHLS AALLISALSI VPTNAAPSPV SSPFTVNATV LTGCVLGGGA 
TDSSNFGSIN FGNITSLATA INATSGLNAG TITIQCNGNP SVTLALNSGA NMTGNISAGR 
HLLNSSTGEY LLYQIYQNSP RTLIWGDGSN GGATQVIATD GTLQQVILYA QLFASNTQPT 
AGVYLDTLLV TVTY