Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1652 |
Symbol | alr1 |
ID | 5388503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1923462 |
End bp | 1924691 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640864633 |
Product | alanine racemase |
Protein accession | YP_001400629 |
Protein GI | 153950742 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGTTC GTTTTCGTCA TTTATTCTTA TTACCATTAA TAACTTTGGT CGCTTGTAGC CAACCCGTAT CAAAAAACCA TCTTAGCCTG ACCTCACTAT CTGCCAACGC CCAGCAACCT GTAGTAAATA ATGCGTGGCT TGAAATCTCT CAAGGTGCGC TGGATTTCAA TACTAAAAAG ATGCTTACAC TGCTGGATAA TAAATCCACA CTTTGTGCAA TATTAAAAGG TGATGCCTAT GGACATGACC TGACCTTAGT CACACCGGTG ATGCTAAAAA ACAATGTGCA ATGTATTGGG GTTGCCAGCA ATCAGGAACT AAAAACGGTA CGTGATCTAG GATTTACGGG TCAGTTGATA CGGGTCAGAA GTGCAACATT AAAAGAAATG CAACAAGCTA TGGCTTACGA TGTTGAAGAA CTTATTGGCG ATAAAACCGT CGCTGAGCAG TTAAATAATA TTGCAAAACT GAATGGAAAA GTTCTGCGTA TCCATCTGGC ACTGAACTCC GCAGGGATGT CTCGTAATGG GCTGGAGGTC AGTAAGGCCC GCGGTTTAAA TGACGCAAAG ACAATTGCAG GTTTAAAAAA TCTGACAATC GTTGGCATCA TGTCGCACTA CCCGGTGGAA GATGCTAGCG AAATCAAAGC AGACTTGGCT CGATTCCAGC AACAAGCCAA AGATGTTATC GCGGTCACGG GGCTAAAACG TGAAAAGATT AAGCTCCACG TCGCCAATAC ATTCGCGACC TTAGCGGTGC CTGATTCATG GTTGGATATG GTCCGTGTGG GAGGGGTGTT TTATGGTGAC ACCATCGCCA GCACAGAGTA TAAGCGGGTC ATGACCTTCA AATCTAACAT CGCATCGCTG AACAACTACC CTAAGGGCGG TACTGTTGGC TATGACCGGA CCTATACATT GAAACGTGAT TCCCTGCTGG CGAATATCCC CGTGGGTTAT GCCGATGGGT ATCGCCGAGT ATTTAGTAAT GCGGGGCATG TGATTATTCA AGGTCAGCGC CTGCCCGTAT TAGGCAAAAC ATCAATGAAT ACGGTCATAG TAGACGTCAC CGATCTGAAA AAAGTGAGTT TAGGTGATGA AGTTGTCTTG TTCGGTAAGC AAGGCAATGC GGAAATTCAG GCAGAAGAAA TTGAAGATCT CAGTGGCGCA CTCTTTACCG AAATGTCAAT TCTGTGGGGC GCAACCAATA AGCGTATTCT GGTAGATTAA
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Protein sequence | MHVRFRHLFL LPLITLVACS QPVSKNHLSL TSLSANAQQP VVNNAWLEIS QGALDFNTKK MLTLLDNKST LCAILKGDAY GHDLTLVTPV MLKNNVQCIG VASNQELKTV RDLGFTGQLI RVRSATLKEM QQAMAYDVEE LIGDKTVAEQ LNNIAKLNGK VLRIHLALNS AGMSRNGLEV SKARGLNDAK TIAGLKNLTI VGIMSHYPVE DASEIKADLA RFQQQAKDVI AVTGLKREKI KLHVANTFAT LAVPDSWLDM VRVGGVFYGD TIASTEYKRV MTFKSNIASL NNYPKGGTVG YDRTYTLKRD SLLANIPVGY ADGYRRVFSN AGHVIIQGQR LPVLGKTSMN TVIVDVTDLK KVSLGDEVVL FGKQGNAEIQ AEEIEDLSGA LFTEMSILWG ATNKRILVD
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