Gene YpsIP31758_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1649 
Symbol 
ID5384442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1918028 
End bp1918792 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID640864630 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001400626 
Protein GI153947682 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAATA TTGATTATAA TAGTTTTCGT TCAGTAAAAG GATTCAATCG ACGCGTTCGT 
TTTCTTGTGA TGCATTATAC GGCCCTCAAT TTTAAAGATT CTATCGATGC ACTCACGGGG
CCTTCGGTAA GCGCTCATTA CCTGGTCCCC GATCCGACGG AACAAACTTA TATTGATGCC
GGTTTTAAGG ATATGCGTAT TTTTAATCTT GTTGATGAAA ATGAGCGTGC CTGGCATGCA
GGAGTGAGTT ATTGGGATGG TCGGAATAAT CTTAATGACA CCGCTATAGG GATTGAGACC
GTTAATCTTG CTACTGATAA CGATGGCGTA TTCACTTTCC CGCCCTACAA TGTTACCCAG
ATAGCGGCAA TTAAAGCGTT GGCATCAAAT ATTCTTTATC GTTTCCCTGA TATTACGCCA
GTCAATGTCG TTGGCCACAG TGATATTGCA CCTGGTCGAA AAAGTGATCC AGGTGCAGCT
TTTCCGTGGA AGGCACTTTA TGACGCAGGT ATTGGTGCCT GGTATGACGA TGAAACTAAG
CAACGGTATC TGGAGCAGTT TCTTTGTGGC CTGCCATCAA AAAACGATAT TATTTCAAAA
TTGAAACGAT ATGGTTATGA CACGTCTGGC GCAGTCAGTG AGGTGGGATA TAATCAATTA
ATCCGTGCTT TCCAACTTCA TTTTCGGCCA TGTAATTATG ATGGTATACC GGATGCAGAA
ACGGTTGCGA TCCTCTATGC ATTAGTCGAT AAATATAAAC CCTAA
 
Protein sequence
MYNIDYNSFR SVKGFNRRVR FLVMHYTALN FKDSIDALTG PSVSAHYLVP DPTEQTYIDA 
GFKDMRIFNL VDENERAWHA GVSYWDGRNN LNDTAIGIET VNLATDNDGV FTFPPYNVTQ
IAAIKALASN ILYRFPDITP VNVVGHSDIA PGRKSDPGAA FPWKALYDAG IGAWYDDETK
QRYLEQFLCG LPSKNDIISK LKRYGYDTSG AVSEVGYNQL IRAFQLHFRP CNYDGIPDAE
TVAILYALVD KYKP