Gene YpsIP31758_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1620 
Symbol 
ID5385744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1880502 
End bp1880903 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content48% 
IMG OID640864601 
Productputative transcriptional regulator 
Protein accessionYP_001400597 
Protein GI153948063 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAAAC TACAAAATAT GAATGGCAAC ATTTCATTTC CGGAACAACT CAGGCGCGGT 
GAACTGCTTA ATGTCGATTG CCCGTCAAGA GAGATACTCA AGCGAGTGAC CAGCCGCTGG
GGGGTGTTGG TCTTGATCGC TTTGAGTAAT GAAACACTGC GTTTTAGTGC ATTGAGACGA
AAGATTGGTG GAGTCAGTGA GAAAATGTTG GCACAAACGC TCCAGCATCT TGAAGAAGAT
GGTTTTATTG ACAGGACTGC TTATCCGGTA GTGCCACCTC ACGTGGAATA CAGCCTCACT
CCGTTAGGAA AAGAGATCCA AGAGCAGGTG GAAGGGCTGA CGGTGTGGTT GGAGACAAAC
TTGCATCGGA TTATGGAACA ACGGCAGCAG CGGTCAGTAT GA
 
Protein sequence
MTKLQNMNGN ISFPEQLRRG ELLNVDCPSR EILKRVTSRW GVLVLIALSN ETLRFSALRR 
KIGGVSEKML AQTLQHLEED GFIDRTAYPV VPPHVEYSLT PLGKEIQEQV EGLTVWLETN
LHRIMEQRQQ RSV