Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1620 |
Symbol | |
ID | 5385744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1880502 |
End bp | 1880903 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864601 |
Product | putative transcriptional regulator |
Protein accession | YP_001400597 |
Protein GI | 153948063 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAAAC TACAAAATAT GAATGGCAAC ATTTCATTTC CGGAACAACT CAGGCGCGGT GAACTGCTTA ATGTCGATTG CCCGTCAAGA GAGATACTCA AGCGAGTGAC CAGCCGCTGG GGGGTGTTGG TCTTGATCGC TTTGAGTAAT GAAACACTGC GTTTTAGTGC ATTGAGACGA AAGATTGGTG GAGTCAGTGA GAAAATGTTG GCACAAACGC TCCAGCATCT TGAAGAAGAT GGTTTTATTG ACAGGACTGC TTATCCGGTA GTGCCACCTC ACGTGGAATA CAGCCTCACT CCGTTAGGAA AAGAGATCCA AGAGCAGGTG GAAGGGCTGA CGGTGTGGTT GGAGACAAAC TTGCATCGGA TTATGGAACA ACGGCAGCAG CGGTCAGTAT GA
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Protein sequence | MTKLQNMNGN ISFPEQLRRG ELLNVDCPSR EILKRVTSRW GVLVLIALSN ETLRFSALRR KIGGVSEKML AQTLQHLEED GFIDRTAYPV VPPHVEYSLT PLGKEIQEQV EGLTVWLETN LHRIMEQRQQ RSV
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