Gene YpsIP31758_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1616 
Symbol 
ID5386779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1875320 
End bp1876363 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content49% 
IMG OID640864597 
ProductLacI family sugar-binding transcriptional regulator 
Protein accessionYP_001400593 
Protein GI153947306 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCAC TGAAAGAAGT GGCAAATCTA GCCTCTGTTT CATTAATGAC CGCATCTCGA 
GCGATTAATA GCCCAGAGCA ACTGCGGCCG GAAACGTATC AGCGAGTGAT GCAGGCGATT 
GAATCCCTGA ATTATGTGCC TGATTTTGCA GCCCGTAAGA TGCGTGGCCA CGCCACCAAA 
ACATCAACCC TGGCAGTACT CGCCTGGGAT ACGGCGACCA CACCGTTCTC AGTTGAAATA 
TTGCTCTCCA TTGAGTTAAC TGCCCGAGAG TTTGGCTGGA ACAGCTTTTT AGTGAACCTA 
ACCTCACGCG AGGACAGCCA ACGGGCGCTT AACCAACTAC TCGCCCAACG GCCCGATGGC 
ATTATTTTTA CCGCTATGGG GCTACGTCAG GTCACCATTC CCGAGCGATT TCGGGATAAA 
AACATTGTTC TCGCTAATTG CGTCAGTGAA AGCCATTCAA TTCCTAGCTA CATTCCCGAT 
GATTTTGATG GTCAATATCA AGCCATGAAG TTGCTGCTGC AACGCGGATA TCAGCGGCCT 
TTGTGTCTTT ATCTGCCGGA GTGTACCTTG GCAGGCAAGG CCCGGCGGGC AGGGGTAGAA 
AAAGCCTGGC AGGAATCTGC ATTACCAACA GAGCAACTCA ATCAGTGCCA TATAGCGTGG 
GGAGATGAAC ATTATCAGGA TGTCATTCCG CTATTGGAAC GCCATTGCCC TAAGGGAAAA 
CCCAATTTTG ATGTGTTAAT TTGCGGCGAT GACCGTATCG CATTTTTGGC CTATCAGGTT 
TTACTGGCCA AAGGTGTGGT AATTCCACAA CAGGTTGCGG TGATCGGCTA TGGCGATATG 
GTTGGTATGG GTGAATTATA TCTACCACCA CTGACCACAG TACAACTCCC CTATTATGAT 
ATTGGTCGTC AAGCTGCCCT CCATTTAATA AGAGGACGTG AATCGCGGGC AATACATCGG 
TTACCCTGCC CACTACTAGA ACGGGGATCC ATCCGTGACT CAATGCCTAA TAACTGTGTG 
CCTCTTTTCA GTAAACAGCG ATAA
 
Protein sequence
MVSLKEVANL ASVSLMTASR AINSPEQLRP ETYQRVMQAI ESLNYVPDFA ARKMRGHATK 
TSTLAVLAWD TATTPFSVEI LLSIELTARE FGWNSFLVNL TSREDSQRAL NQLLAQRPDG 
IIFTAMGLRQ VTIPERFRDK NIVLANCVSE SHSIPSYIPD DFDGQYQAMK LLLQRGYQRP 
LCLYLPECTL AGKARRAGVE KAWQESALPT EQLNQCHIAW GDEHYQDVIP LLERHCPKGK 
PNFDVLICGD DRIAFLAYQV LLAKGVVIPQ QVAVIGYGDM VGMGELYLPP LTTVQLPYYD 
IGRQAALHLI RGRESRAIHR LPCPLLERGS IRDSMPNNCV PLFSKQR