Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1591 |
Symbol | thiK |
ID | 5387168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1847425 |
End bp | 1848291 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864572 |
Product | thiamine kinase |
Protein accession | YP_001400568 |
Protein GI | 153948734 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | [TIGR02721] thiamine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.196293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGT CCAATATTGA TTCTTCTCTG TCTGCCTTAA TAGCAAACAT CAATCCGGCG GTGAAAACCG CCGATTGTCA TATTAGCCCG GTATCAGGAT TAACCGGTGA AAGTTGGCGT ATTACTGGCC CAGGGATTGA CTGGCTGGCG CGTGAGCAAT CGCCGCACAA AAGTCAGTTG GGGGTCAACC GACGACGTGA GCGTAAATTC CTGCAACATA TTGCTGGCAA TGGGCTGTCT CCAGCGGTGA TTGCGGCTAA TCAGCGTTGG CTAGTGGTGA ACTGGCTTGA AGGTGACGTT GTCACTAATG AGCAGTTCAT CCCATTGGTG AATCATGGGC AATTAGCGCG GTTACTGGCC CGCTTGCATC ATTTGCCCGC GAGTGGTTAC CGTCTGGATT TGCGTGCTCA GATTGCCCGC TATGGGGCGC TTATTGATCC TACGCGCCGT TCACCTGGCG GAGTGCGGCT ACAGCATGAT TTTCTTCGTA GGCCATTACC AGCGATAACA AAAATTGCTC CTTTGCATAT GGATATTCAC CCCGGCAATT TGTTAACAAC CCCCGTTGGG CTGAAATTAA TTGACTGGGA ATATGCGGCA GATGGCGATA TTGCTTTGGA AATTGCCGCG CTATTTCGCG GTAATCATTG GTCAATGCTA CAACAACAGG CTTTTTTGCA GGACTATTGC AACAATGAGC ACGGTTATCA TGACATCGCT CGTTTATCCC GTCAGATTCA GCAATGGTTG CCCTGGGTCG ATTACCTGAT GTTGATGTGG TTTGAAGTGC GTTGGCAGCA AACCGCGGAC CCAATATTCT TGGCATGGGC CGCGCCGTTG CGCCAACGTT TTAATTTGTC TTTTTAA
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Protein sequence | MRLSNIDSSL SALIANINPA VKTADCHISP VSGLTGESWR ITGPGIDWLA REQSPHKSQL GVNRRRERKF LQHIAGNGLS PAVIAANQRW LVVNWLEGDV VTNEQFIPLV NHGQLARLLA RLHHLPASGY RLDLRAQIAR YGALIDPTRR SPGGVRLQHD FLRRPLPAIT KIAPLHMDIH PGNLLTTPVG LKLIDWEYAA DGDIALEIAA LFRGNHWSML QQQAFLQDYC NNEHGYHDIA RLSRQIQQWL PWVDYLMLMW FEVRWQQTAD PIFLAWAAPL RQRFNLSF
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