Gene YpsIP31758_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1589 
Symbol 
ID5388375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1846439 
End bp1846828 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content49% 
IMG OID640864570 
Productputative lipoprotein 
Protein accessionYP_001400566 
Protein GI153949893 
COG category[R] General function prediction only 
COG ID[COG5633] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0973064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATC TTAAAACGTT GCTATTACCC GTGATATTGT TCGCTTGCGT AACAACATTG 
CTGGGGTGCA GCAGCCCGCA AGGGATCGCG GTTAACCCAC AGCAAACTGT CGTGATGGAT
CCATCGGTAC TGACGGCCGG TATTCTGGCT TCCCAACCGG TGATCTCCGC CTCCTCGGGT
AAAAATGTTG CCCGCTCGGT GCTCAGTAAC AGTCGGAACA TACCGGCAAA AATACACTAT
CGTTTTTATT GGTATGATGC GCAGGGGCTG GATGTCCGGC CACTGGAAGC AACGCGTTCT
ATTGTGATCG CACCGGGTGA TGATGTGGCT ATTCAGTCAA TTAACAATAA TTTTAATGCG
CGCAGTGCGC GTCTCTATTT ATTTTTATAA
 
Protein sequence
MRDLKTLLLP VILFACVTTL LGCSSPQGIA VNPQQTVVMD PSVLTAGILA SQPVISASSG 
KNVARSVLSN SRNIPAKIHY RFYWYDAQGL DVRPLEATRS IVIAPGDDVA IQSINNNFNA
RSARLYLFL